Christina Boucher
Title
Cited by
Cited by
Year
MEGARes: an antimicrobial resistance database for high throughput sequencing
SM Lakin, C Dean, NR Noyes, A Dettenwanger, AS Ross, E Doster, ...
Nucleic acids research 45 (D1), D574-D580, 2017
1782017
Use of metagenomic shotgun sequencing technology to detect foodborne pathogens within the microbiome of the beef production chain
X Yang, NR Noyes, E Doster, JN Martin, LM Linke, RJ Magnuson, H Yang, ...
Applied and Environmental Microbiology 82 (8), 2433-2443, 2016
822016
Succinct colored de Bruijn graphs
MD Muggli, A Bowe, NR Noyes, PS Morley, KE Belk, R Raymond, T Gagie, ...
Bioinformatics 33 (20), 3181-3187, 2017
702017
Resistome diversity in cattle and the environment decreases during beef production
NR Noyes, X Yang, LM Linke, RJ Magnuson, A Dettenwanger, S Cook, ...
Elife 5, e13195, 2016
702016
SEQuel: improving the accuracy of genome assemblies
R Ronen, C Boucher, H Chitsaz, P Pevzner
Bioinformatics 28 (12), i188-i196, 2012
672012
Exploring non-touchscreen gestures for smartwatches
SS Arefin Shimon, C Lutton, Z Xu, S Morrison-Smith, C Boucher, J Ruiz
Proceedings of the 2016 CHI Conference on Human Factors in Computing Systems …, 2016
662016
Characterization of the resistome in manure, soil and wastewater from dairy and beef production systems
NR Noyes, X Yang, LM Linke, RJ Magnuson, SR Cook, R Zaheer, H Yang, ...
Scientific Reports 6 (1), 1-12, 2016
592016
The SLOW GROWTH3 pentatricopeptide repeat protein is required for the splicing of mitochondrial NADH dehydrogenase subunit7 intron 2 in Arabidopsis
WY Hsieh, JC Liao, CY Chang, T Harrison, C Boucher, MH Hsieh
Plant Physiology 168 (2), 490-501, 2015
552015
Variable-order de Bruijn graphs
C Boucher, A Bowe, T Gagie, SJ Puglisi, K Sadakane
2015 data compression conference, 383-392, 2015
502015
Misassembly detection using paired-end sequence reads and optical mapping data
MD Muggli, SJ Puglisi, R Ronen, C Boucher
Bioinformatics 31 (12), i80-i88, 2015
392015
Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable
C Mavian, SK Pond, S Marini, BR Magalis, AM Vandamme, S Dellicour, ...
Proceedings of the National Academy of Sciences 117 (23), 12522-12523, 2020
322020
Efficient indexed alignment of contigs to optical maps
MD Muggli, SJ Puglisi, C Boucher
International Workshop on Algorithms in Bioinformatics, 68-81, 2014
32*2014
Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing
NR Noyes, ME Weinroth, JK Parker, CJ Dean, SM Lakin, RA Raymond, ...
Microbiome 5 (1), 1-13, 2017
272017
Closest string with outliers
C Boucher, B Ma
BMC bioinformatics 12 (1), 1-7, 2011
202011
On the structure of small motif recognition instances
C Boucher, DG Brown, S Durocher
International Symposium on String Processing and Information Retrieval, 269-281, 2008
202008
MEGARes 2.0: a database for classification of antimicrobial drug, biocide and metal resistance determinants in metagenomic sequence data
E Doster, SM Lakin, CJ Dean, C Wolfe, JG Young, C Boucher, KE Belk, ...
Nucleic acids research 48 (D1), D561-D569, 2020
182020
Prefix-free parsing for building big BWTs
C Boucher, T Gagie, A Kuhnle, B Langmead, G Manzini, T Mun
Algorithms for Molecular Biology 14 (1), 13, 2019
182019
Targeted enrichment for pathogen detection and characterization in three felid species
JS Lee, RS Mackie, T Harrison, B Shariat, T Kind, T Kehl, M Löchelt, ...
Journal of clinical microbiology 55 (6), 1658-1670, 2017
182017
Investigating effects of tulathromycin metaphylaxis on the fecal resistome and microbiome of commercial feedlot cattle early in the feeding period
E Doster, P Rovira, NR Noyes, BA Burgess, X Yang, MD Weinroth, ...
Frontiers in microbiology 9, 1715, 2018
172018
Selection of molecular descriptors with artificial intelligence for the understanding of HIV-1 protease peptidomimetic inhibitors-activity
S Sirois, CM Tsoukas, KC Chou, D Wei, C Boucher, GE Hatzakis
Medicinal Chemistry 1 (2), 173-184, 2005
172005
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Articles 1–20