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Kary Ocaña
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A provenance-based adaptive scheduling heuristic for parallel scientific workflows in clouds
D de Oliveira, KACS Ocaña, F Baião, M Mattoso
Journal of grid Computing 10, 521-552, 2012
1442012
Sciphy: a cloud-based workflow for phylogenetic analysis of drug targets in protozoan genomes
KACS Ocaña, D de Oliveira, E Ogasawara, AMR Dávila, AAB Lima, ...
Advances in Bioinformatics and Computational Biology: 6th Brazilian …, 2011
1182011
Capturing and querying workflow runtime provenance with PROV: a practical approach
F Costa, V Silva, D De Oliveira, K Ocaña, E Ogasawara, J Dias, M Mattoso
Proceedings of the Joint EDBT/ICDT 2013 Workshops, 282-289, 2013
1022013
Dynamic steering of HPC scientific workflows: A survey
M Mattoso, J Dias, KACS Ocana, E Ogasawara, F Costa, F Horta, V Silva, ...
Future Generation Computer Systems 46, 100-113, 2015
922015
An adaptive parallel execution strategy for cloud‐based scientific workflows
D de Oliveira, E Ogasawara, K Ocaña, F Baião, M Mattoso
Concurrency and Computation: Practice and Experience 24 (13), 1531-1550, 2012
642012
Performance evaluation of parallel strategies in public clouds: A study with phylogenomic workflows
D De Oliveira, KACS Ocana, E Ogasawara, J Dias, J Gonçalves, F Baiao, ...
Future Generation Computer Systems 29 (7), 1816-1825, 2013
482013
Optimizing phylogenetic analysis using scihmm cloud-based scientific workflow
KACS Ocaña, D de Oliveira, J Dias, E Ogasawara, M Mattoso
2011 IEEE Seventh International Conference on eScience, 62-69, 2011
442011
Exploring molecular evolution reconstruction using a parallel cloud based scientific workflow
KACS Ocaña, D de Oliveira, F Horta, J Dias, E Ogasawara, M Mattoso
Advances in Bioinformatics and Computational Biology: 7th Brazilian …, 2012
412012
Parallel computing in genomic research: advances and applications
K Ocaña, D de Oliveira
Advances and applications in bioinformatics and chemistry, 23-35, 2015
392015
User-steering of HPC workflows: state-of-the-art and future directions
M Mattoso, K Ocana, F Horta, J Dias, E Ogasawara, V Silva, D de Oliveira, ...
Proceedings of the 2nd ACM SIGMOD Workshop on Scalable Workflow Execution …, 2013
372013
A performance evaluation of x-ray crystallography scientific workflow using scicumulus
D de Oliveira, K Ocana, E Ogasawara, J Dias, F Baiao, M Mattoso
2011 IEEE 4th International Conference on Cloud Computing, 708-715, 2011
342011
ProtozoaDB: dynamic visualization and exploration of protozoan genomes
AMR Davila, PN Mendes, G Wagner, DA Tschoeke, RRC Cuadrat, ...
Nucleic acids research 36 (suppl_1), D547-D552, 2007
292007
Dimensioning the virtual cluster for parallel scientific workflows in clouds
D de Oliveira, V Viana, E Ogasawara, K Ocana, M Mattoso
Proceedings of the 4th ACM workshop on Scientific cloud computing, 5-12, 2013
232013
Enabling re-executions of parallel scientific workflows using runtime provenance data
F Costa, D de Oliveira, KACS Ocaña, E Ogasawara, M Mattoso
Provenance and Annotation of Data and Processes: 4th International …, 2012
212012
Provenance-based fault tolerance technique recommendation for cloud-based scientific workflows: a practical approach
T Guedes, LA Jesus, KACS Ocaña, LMA Drummond, D de Oliveira
Cluster Computing 23 (1), 123-148, 2020
202020
Exploring large scale receptor-ligand pairs in molecular docking workflows in HPC clouds
K Ocaña, S Benza, D De Oliveira, J Dias, M Mattoso
2014 IEEE International Parallel & Distributed Processing Symposium …, 2014
202014
Designing a parallel cloud based comparative genomics workflow to improve phylogenetic analyses
KACS Ocaña, D De Oliveira, J Dias, E Ogasawara, M Mattoso
Future Generation Computer Systems 29 (8), 2205-2219, 2013
202013
Using domain-specific data to enhance scientific workflow steering queries
JC de AR Gonçalves, D de Oliveira, KACS Ocaña, E Ogasawara, ...
Provenance and Annotation of Data and Processes: 4th International …, 2012
202012
Capturing and analyzing provenance from spark-based scientific workflows with SAMbA-RaP
T Guedes, LB Martins, MLF Falci, V Silva, KACS Ocaña, M Mattoso, ...
Future Generation Computer Systems 112, 658-669, 2020
192020
Phylogenomics-based reconstruction of protozoan species tree
KAS Ocaña, AM Dávila
Evolutionary Bioinformatics 7, EBO. S6861, 2011
192011
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