Paolo Manghi
Paolo Manghi
PhD student, computational metagenomics lab, Dep. of Cellular, Computational and Integrative Biology
Verified email at unitn.it
Title
Cited by
Cited by
Year
Extensive unexplored human microbiome diversity revealed by over 150,000 genomes from metagenomes spanning age, geography, and lifestyle
E Pasolli, F Asnicar, S Manara, M Zolfo, N Karcher, F Armanini, F Beghini, ...
Cell 176 (3), 649-662. e20, 2019
5532019
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ...
Nature medicine 25 (4), 679-689, 2019
3172019
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ...
Nature medicine 25 (4), 667-678, 2019
2612019
Accessible, curated metagenomic data through ExperimentHub
E Pasolli, L Schiffer, P Manghi, A Renson, V Obenchain, DT Truong, ...
Nature methods 14 (11), 1023-1024, 2017
1562017
The Prevotella copri complex comprises four distinct clades underrepresented in westernized populations
A Tett, KD Huang, F Asnicar, H Fehlner-Peach, E Pasolli, N Karcher, ...
Cell host & microbe 26 (5), 666-679. e7, 2019
1222019
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0
F Asnicar, AM Thomas, F Beghini, C Mengoni, S Manara, P Manghi, ...
Nature communications 11 (1), 1-10, 2020
662020
Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3
F Beghini, LJ McIver, A Blanco-Míguez, L Dubois, F Asnicar, S Maharjan, ...
Elife 10, e65088, 2021
422021
Detecting contamination in viromes using ViromeQC
M Zolfo, F Pinto, F Asnicar, P Manghi, A Tett, FD Bushman, N Segata
Nature Biotechnology 37 (12), 1408-1412, 2019
252019
Altered fecal small RNA profiles in colorectal cancer reflect gut microbiome composition in stool samples
S Tarallo, G Ferrero, G Gallo, A Francavilla, G Clerico, A Realis Luc, ...
Msystems 4 (5), e00289-19, 2019
252019
Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species
S Manara, F Asnicar, F Beghini, D Bazzani, F Cumbo, M Zolfo, E Nigro, ...
Genome biology 20 (1), 1-16, 2019
222019
Profiling microbial strains in urban environments using metagenomic sequencing data
M Zolfo, F Asnicar, P Manghi, E Pasolli, A Tett, N Segata
Biology direct 13 (1), 1-13, 2018
192018
Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations
N Karcher, E Pasolli, F Asnicar, KD Huang, A Tett, S Manara, F Armanini, ...
Genome biology 21, 1-27, 2020
182020
Strong oral plaque microbiome signatures for dental implant diseases identified by strain-resolution metagenomics
P Ghensi, P Manghi, M Zolfo, F Armanini, E Pasolli, M Bolzan, A Bertelle, ...
NPJ biofilms and microbiomes 6 (1), 1-12, 2020
112020
Microbiome as Mediator of Diet on Colorectal Cancer Risk: The Role of Vitamin D, Markers of Inflammation and Adipokines
D Serrano, C Pozzi, S Guglietta, B Fosso, M Suppa, P Gnagnarella, ...
Nutrients 13 (2), 363, 2021
42021
Author Correction: metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ...
Nature medicine 25 (12), 1948-1948, 2019
22019
Correction for Tarallo et al.,“Altered Fecal Small RNA Profiles in Colorectal Cancer Reflect Gut Microbiome Composition in Stool Samples”
S Tarallo, G Ferrero, G Gallo, A Francavilla, G Clerico, A Realis Luc, ...
Msystems 5 (1), e00072-20, 2020
12020
Metagenomic analysis of ancient dental calculus reveals unexplored diversity of oral archaeal Methanobrevibacter
L Granehäll, KD Huang, A Tett, P Manghi, A Paladin, N O’Sullivan, ...
Microbiome 9 (1), 1-18, 2021
2021
Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly
N Karcher, E Nigro, M Punčochář, A Blanco-Míguez, M Ciciani, P Manghi, ...
Genome Biology 22 (1), 1-24, 2021
2021
The gut microbiome and colorectal cancer.
M Zolfo, AM Thomas, P Manghi, L Waldron, A Naccarati, N Segata
CANCER SCIENCE 112, 168-168, 2021
2021
Molecular and microscopic analysis of human paleofeces from the salt mines in Hallstatt, Austria, provide precious insights into dietary habits and gut microbiome composition …
F Maixner, MSM Sarhan, KD Huang, A Tett, A Schoenafinger, S Zingale, ...
ISBA9: 9TH INTERNATIONAL SYMPOSIUM ON BIOMOLECULAR ARCHAEOLOGY, 2021
2021
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