COVID-19 in Amazonas, Brazil, was driven by the persistence of endemic lineages and P. 1 emergence FG Naveca, V Nascimento, VC de Souza, AL Corado, F Nascimento, ... Nature medicine 27 (7), 1230-1238, 2021 | 398 | 2021 |
COVID-19 epidemic in the Brazilian state of Amazonas was driven by long-term persistence of endemic SARS-CoV-2 lineages and the recent emergence of the new Variant of Concern P. 1 F Naveca, V Nascimento, V Souza, A Corado, F Nascimento, G Silva, ... | 91 | 2021 |
Lying in wait: the resurgence of dengue virus after the Zika epidemic in Brazil AF Brito, LC Machado, RJ Oidtman, MJL Siconelli, QM Tran, JR Fauver, ... Nature communications 12 (1), 2619, 2021 | 68 | 2021 |
Multiple introductions followed by ongoing community spread of SARS-CoV-2 at one of the largest metropolitan areas of Northeast Brazil MHS Paiva, DRD Guedes, C Docena, MF Bezerra, FZ Dezordi, ... Viruses 12 (12), 1414, 2020 | 53 | 2020 |
ViralFlow: a versatile automated workflow for SARS-CoV-2 genome assembly, lineage assignment, mutations and intrahost variant detection FZ Dezordi, AMS Neto, TL Campos, PMC Jeronimo, CF Aksenen, ... Viruses 14 (2), 217, 2022 | 46 | 2022 |
The ongoing evolution of variants of concern and interest of SARS-CoV-2 in Brazil revealed by convergent indels in the amino (N)-terminal domain of the spike protein PC Resende, FG Naveca, RD Lins, FZ Dezordi, MVF Ferraz, EG Moreira, ... Virus evolution 7 (2), veab069, 2021 | 44 | 2021 |
Systematic Review of Wolbachia Symbiont Detection in Mosquitoes: An Entangled Topic about Methodological Power and True Symbiosis LM Inacio da Silva, FZ Dezordi, MHS Paiva, GL Wallau Pathogens 10 (1), 39, 2021 | 41 | 2021 |
In and outs of Chuviridae endogenous viral elements: origin of a potentially new retrovirus and signature of ancient and ongoing arms race in mosquito genomes FZ Dezordi, CRS Vasconcelos, AM Rezende, GL Wallau Frontiers in Genetics 11, 542437, 2020 | 31 | 2020 |
Identification of a novel SARS-CoV-2 P. 1 sub-lineage in Brazil provides new insights about the mechanisms of emergence of variants of concern T Gräf, G Bello, TMM Venas, EC Pereira, ACD Paixão, LR Appolinario, ... Virus Evolution 7 (2), veab091, 2021 | 29 | 2021 |
Unusual SARS-CoV-2 intrahost diversity reveals lineage superinfection FZ Dezordi, PC Resende, FG Naveca, VA do Nascimento, VC de Souza, ... Microbial Genomics 8 (3), 000751, 2022 | 28 | 2022 |
HTT-DB: new features and updates BR Dotto, EL Carvalho, AF da Silva, FZ Dezordi, PM Pinto, TL Campos, ... Database 2018, bax102, 2018 | 25 | 2018 |
Phylogenetic-based inference reveals distinct transmission dynamics of SARS-CoV-2 lineages Gamma and P. 2 in Brazil T Gräf, G Bello, FG Naveca, M Gomes, VLO Cardoso, AF da Silva, ... Iscience 25 (4), 2022 | 14 | 2022 |
on behalf of the Fiocruz COVID-19 Genomic Surveillance Network FZ Dezordi, A Neto, TDL Campos, CF Aksenen, SP Almeida, GL Wallau ViralFlow: a versatile automated workflow for SARS-CoV-2 genome assembly …, 2022 | 12 | 2022 |
Identification of SARS-CoV-2 P. 1-related lineages in Brazil provides new insights about the mechanisms of emergence of Variants of Concern T Gräf, G Bello, TMM Venas, EC Pereira, ACD Paixão, LR Appolinario, ... | 12 | 2021 |
Highly pathogenic avian influenza H5N1 virus infections in pinnipeds and seabirds in Uruguay: Implications for bird–mammal transmission in South America G Tomás, A Marandino, Y Panzera, S Rodríguez, GL Wallau, FZ Dezordi, ... Virus Evolution 10 (1), veae031, 2024 | 11 | 2024 |
De novo Assembly and Annotation of the Antarctic Alga Prasiola crispa Transcriptome EL Carvalho, LF Maciel, PE Macedo, FZ Dezordi, MET Abreu, FC Victoria, ... Frontiers in Molecular Biosciences 4, 89, 2018 | 10 | 2018 |
Drosophila parasitoid wasps bears a distinct DNA transposon profile AF da Silva, FZ Dezordi, ELS Loreto, GL Wallau Mobile DNA 9, 1-13, 2018 | 8 | 2018 |
Metatranscriptomic analysis identifies different viral-like sequences in two neotropical Mansoniini mosquito species AF da Silva, FZ Dezordi, LC Machado, RD de Oliveira, S Qin, H Fan, ... Virus Research 301, 198455, 2021 | 7 | 2021 |
Multiple Introductions Followed by Ongoing Community Spread of SARS-CoV-2 at One of the Largest Metropolitan Areas of Northeast Brazil. Viruses. 2020; 12: 1414 MHS Paiva, DRD Guedes, C Docena, MF Bezerra, FZ Dezordi, ... | 6 | |
ViralFlow v1. 0—a computational workflow for streamlining viral genomic surveillance AF da Silva, AM da Silva Neto, CF Aksenen, PMC Jeronimo, FZ Dezordi, ... NAR Genomics and Bioinformatics 6 (2), lqae056, 2024 | 4 | 2024 |