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T. M. Murali
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Extracting conserved gene expression motifs from gene expression data
TM Murali, S Kasif
Biocomputing 2003, 77-88, 2002
4942002
A Monte Carlo algorithm for fast projective clustering
CM Procopiuc, M Jones, PK Agarwal, TM Murali
Proceedings of the 2002 ACM SIGMOD international conference on Management of …, 2002
4912002
Whole-genome annotation by using evidence integration in functional-linkage networks
U Karaoz, TM Murali, S Letovsky, Y Zheng, C Ding, CR Cantor, S Kasif
Proceedings of the National Academy of Sciences 101 (9), 2888-2893, 2004
3982004
The landscape of human proteins interacting with viruses and other pathogens
MD Dyer, TM Murali, BW Sobral
PLoS pathogens 4 (2), e32, 2008
3412008
RankGene: identification of diagnostic genes based on expression data
Y Su, TM Murali, V Pavlovic, M Schaffer, S Kasif
Bioinformatics 19 (12), 1578-1579, 2003
2342003
Computational prediction of host-pathogen protein–protein interactions
MD Dyer, TM Murali, BW Sobral
Bioinformatics 23 (13), i159-i166, 2007
1942007
Benchmarking algorithms for gene regulatory network inference from single-cell transcriptomic data
A Pratapa, AP Jalihal, JN Law, A Bharadwaj, TM Murali
Nature methods 17 (2), 147-154, 2020
1922020
The human-bacterial pathogen protein interaction networks of Bacillus anthracis, Francisella tularensis, and Yersinia pestis
MD Dyer, C Neff, M Dufford, CG Rivera, D Shattuck, J Bassaganya-Riera, ...
PloS one 5 (8), e12089, 2010
1492010
Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin
JZ Ruscio, D Kumar, M Shukla, MG Prisant, TM Murali, AV Onufriev
Proceedings of the National Academy of Sciences 105 (27), 9204-9209, 2008
1492008
Consistent solid and boundary representations from arbitrary polygonal data
TM Murali, TA Funkhouser
Proceedings of the 1997 symposium on Interactive 3D graphics, 155-ff., 1997
1461997
Sweeping simple polygons with a chain of guards
A Efrat, LJ Guibas, S Har-Peled, DC Lin, JSB Mitchell, TM Murali
Proceedings of the eleventh annual ACM-SIAM symposium on Discrete algorithms …, 2000
1112000
New similarity measures between polylines with applications to morphing and polygon sweeping
A Efrat, LJ Guibas, JSB Har-Peled, Sariel, Mitchell, TM Murali
Discrete & Computational Geometry 28 (4), 535-569, 2002
1022002
Supervised learning and prediction of physical interactions between human and HIV proteins
MD Dyer, TM Murali, BW Sobral
Infection, Genetics and Evolution 11 (5), 917-923, 2011
1002011
The art of gene function prediction
TM Murali, CJ Wu, S Kasif
Nature biotechnology 24 (12), 1474-1475, 2006
922006
Planning robot motion strategies for efficient model construction
H González-Baños, E Mao, JC Latombe, TM Murali, A Efrat
Robotics Research, 345-352, 2000
922000
Automatic layout and visualization of biclusters
GA Grothaus, A Mufti, TM Murali
Algorithms for Molecular Biology 1 (1), 1-11, 2006
822006
I/O-efficient algorithms for contour line extraction and planar graph blocking
PK Agarwal, L Arge, TM Murali, V Kasturi R, JS Vitter
Society for Industrial and Applied Mathematics, 1998
811998
Cylindrical static and kinetic binary space partitions
PK Agarwal, LJ Guibas, TM Murali, JS Vitter
Computational Geometry 16 (2), 103-127, 2000
792000
Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field
P Li, A Sioson, SP Mane, A Ulanov, G Grothaus, LS Heath, TM Murali, ...
Plant molecular biology 62 (4), 593-609, 2006
772006
PIG—the pathogen interaction gateway
T Driscoll, MD Dyer, TM Murali, BW Sobral
Nucleic acids research 37 (suppl_1), D647-D650, 2009
722009
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