Phanourios Tamamis
Phanourios Tamamis
Assistant Professor, Department of Chemical Engineering, Texas A&M University
Verified email at tamu.edu - Homepage
Title
Cited by
Cited by
Year
Self-assembly of phenylalanine oligopeptides: insights from experiments and simulations
P Tamamis, L Adler-Abramovich, M Reches, K Marshall, P Sikorski, ...
Biophysical journal 96 (12), 5020-5029, 2009
1902009
Molecular recognition of CCR5 by an HIV-1 gp120 V3 loop
P Tamamis, CA Floudas
PloS one 9 (4), e95767, 2014
682014
Molecular recognition of CXCR4 by a dual tropic HIV-1 gp120 V3 loop
P Tamamis, CA Floudas
Biophysical journal 105 (6), 1502-1514, 2013
582013
Elucidating a key component of cancer metastasis: CXCL12 (SDF-1α) binding to CXCR4
P Tamamis, CA Floudas
Journal of chemical information and modeling 54 (4), 1174-1188, 2014
552014
Forcefield_NCAA: Ab Initio Charge Parameters to Aid in the Discovery and Design of Therapeutic Proteins and Peptides with Unnatural Amino Acids and Their …
GA Khoury, J Smadbeck, P Tamamis, AC Vandris, CA Kieslich, ...
ACS synthetic biology 3 (12), 855-869, 2014
462014
Species specificity of the complement inhibitor compstatin investigated by all‐atom molecular dynamics simulations
P Tamamis, D Morikis, CA Floudas, G Archontis
Proteins: Structure, Function, and Bioinformatics 78 (12), 2655-2667, 2010
462010
Elucidating a key anti-HIV-1 and cancer-associated axis: the structure of CCL5 (Rantes) in complex with CCR5
P Tamamis, CA Floudas
Scientific reports 4, 5447, 2014
432014
Molecular dynamics in drug design: new generations of compstatin analogs
P Tamamis, A Lopez de Victoria, RD Gorham Jr, ML Bellows‐Peterson, ...
Chemical biology & drug design 79 (5), 703-718, 2012
432012
Amyloid-like self-assembly of peptide sequences from the adenovirus fiber shaft: insights from molecular dynamics simulations
P Tamamis, E Kasotakis, A Mitraki, G Archontis
The Journal of Physical Chemistry B 113 (47), 15639-15647, 2009
412009
Design of a modified mouse protein with ligand binding properties of its human analog by molecular dynamics simulations: the case of C3 inhibition by compstatin
P Tamamis, P Pierou, C Mytidou, CA Floudas, D Morikis, G Archontis
Proteins: Structure, Function, and Bioinformatics 79 (11), 3166-3179, 2011
352011
Structure-dependent modulation of aryl hydrocarbon receptor-mediated activities by flavonoids
UH Jin, H Park, X Li, LA Davidson, C Allred, B Patil, G Jayaprakasha, ...
Toxicological Sciences 164 (1), 205-217, 2018
312018
Princeton_TIGRESS: Protein geometry refinement using simulations and support vector machines
GA Khoury, P Tamamis, N Pinnaduwage, J Smadbeck, CA Kieslich, ...
Proteins: Structure, Function, and Bioinformatics 82 (5), 794-814, 2014
292014
Insights into the mechanism of C5aR inhibition by PMX53 via implicit solvent molecular dynamics simulations and docking
P Tamamis, CA Kieslich, GV Nikiforovich, TM Woodruff, D Morikis, ...
BMC biophysics 7 (1), 5, 2014
252014
Novel compstatin family peptides inhibit complement activation by drusen-like deposits in human retinal pigmented epithelial cell cultures
RD Gorham Jr, DL Forest, P Tamamis, AL de Victoria, M Kraszni, ...
Experimental eye research 116, 96-108, 2013
252013
Insights into the structure, correlated motions, and electrostatic properties of two HIV-1 gp120 V3 loops
AL de Victoria, P Tamamis, CA Kieslich, D Morikis
PLoS One 7 (11), e49925, 2012
252012
Highly accurate structure-based prediction of HIV-1 coreceptor usage suggests intermolecular interactions driving tropism
CA Kieslich, P Tamamis, YA Guzman, M Onel, CA Floudas
PloS one 11 (2), e0148974, 2016
242016
Self-assembly of an aspartate-rich sequence from the adenovirus fiber shaft: insights from molecular dynamics simulations and experiments
P Tamamis, K Terzaki, M Kassinopoulos, L Mastrogiannis, E Mossou, ...
The Journal of Physical Chemistry B 118 (7), 1765-1774, 2014
232014
Editor’s highlight: Microbial-derived 1, 4-dihydroxy-2-naphthoic acid and related compounds as aryl hydrocarbon receptor agonists/antagonists: Structure–activity relationships …
Y Cheng, UH Jin, LA Davidson, RS Chapkin, A Jayaraman, P Tamamis, ...
Toxicological Sciences 155 (2), 458-473, 2017
212017
Self-assembled amyloid peptides with Arg-Gly-Asp (RGD) motifs as scaffolds for tissue engineering
G Deidda, SVR Jonnalagadda, JW Spies, A Ranella, E Mossou, ...
ACS Biomaterials Science & Engineering 3 (7), 1404-1416, 2017
202017
Amyloid-like self-assembly of a dodecapeptide sequence from the adenovirus fiber shaft: Perspectives from molecular dynamics simulations
P Tamamis, G Archontis
Journal of Non-Crystalline Solids 357 (2), 717-722, 2011
202011
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