Andrei Osterman
Andrei Osterman
Sanford Burnham Prebys Medical Discovery Inst
Verified email at - Homepage
Cited by
Cited by
The RAST Server: rapid annotations using subsystems technology
RK Aziz, D Bartels, AA Best, M DeJongh, T Disz, RA Edwards, K Formsma, ...
BMC genomics 9, 1-15, 2008
Protein tyrosine phosphatases in the human genome
A Alonso, J Sasin, N Bottini, I Friedberg, I Friedberg, A Osterman, ...
Cell 117 (6), 699-711, 2004
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ...
Nucleic acids research 33 (17), 5691-5702, 2005
Towards environmental systems biology of Shewanella
JK Fredrickson, MF Romine, AS Beliaev, JM Auchtung, ME Driscoll, ...
Nature Reviews Microbiology 6 (8), 592-603, 2008
Experimental Determination and System Level Analysis of Essential Genes in Escherichia coli MG1655
SY Gerdes, MD Scholle, JW Campbell, G Balazsi, E Ravasz, ...
Journal of bacteriology 185 (19), 5673-5684, 2003
An agonist of toll-like receptor 5 has radioprotective activity in mouse and primate models
LG Burdelya, VI Krivokrysenko, TC Tallant, E Strom, AS Gleiberman, ...
Science 320 (5873), 226-230, 2008
Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children
LV Blanton, MR Charbonneau, T Salih, MJ Barratt, S Venkatesh, ...
Science 351 (6275), aad3311, 2016
Structural basis of TLR5-flagellin recognition and signaling
S Yoon, O Kurnasov, V Natarajan, M Hong, AV Gudkov, AL Osterman, ...
Science 335 (6070), 859-864, 2012
Comparative metabolic flux profiling of melanoma cell lines: beyond the Warburg effect
DA Scott, AD Richardson, FV Filipp, CA Knutzen, GG Chiang, AR Ze'ev, ...
Journal of Biological Chemistry 286 (49), 42626-42634, 2011
Missing genes in metabolic pathways: a comparative genomics approach
A Osterman, R Overbeek
Current opinion in chemical biology 7 (2), 238-251, 2003
Bcl-2 and Bcl-XL regulate proinflammatory caspase-1 activation by interaction with NALP1
JM Bruey, N Bruey-Sedano, F Luciano, D Zhai, R Balpai, C Xu, CL Kress, ...
Cell 129 (1), 45-56, 2007
Effects of microbiota-directed foods in gnotobiotic animals and undernourished children
JL Gehrig, S Venkatesh, HW Chang, MC Hibberd, VL Kung, J Cheng, ...
Science 365 (6449), eaau4732, 2019
A novel class of modular transporters for vitamins in prokaryotes
DA Rodionov, P Hebbeln, A Eudes, J ter Beek, IA Rodionova, GB Erkens, ...
Journal of bacteriology 191 (1), 42-51, 2009
From genetic footprinting to antimicrobial drug targets: examples in cofactor biosynthetic pathways
SY Gerdes, MD Scholle, M D'Souza, A Bernal, MV Baev, M Farrell, ...
Journal of bacteriology 184 (16), 4555-4572, 2002
Experimental and Computational Assessment of Conditionally Essential Genes in Escherichia coli
AR Joyce, JL Reed, A White, R Edwards, A Osterman, T Baba, H Mori, ...
Journal of bacteriology 188 (23), 8259-8271, 2006
The ERGO TM genome analysis and discovery system
R Overbeek, N Larsen, T Walunas, M D'Souza, G Pusch, E Selkov Jr, ...
Nucleic acids research 31 (1), 164-171, 2003
Complete reconstitution of the human coenzyme A biosynthetic pathway via comparative genomics
M Daugherty, B Polanuyer, M Farrell, M Scholle, A Lykidis, ...
Journal of Biological Chemistry 277 (24), 21431-21439, 2002
NAD biosynthesis: identification of the tryptophan to quinolinate pathway in bacteria
O Kurnasov, V Goral, K Colabroy, S Gerdes, S Anantha, A Osterman, ...
Chemistry & biology 10 (12), 1195-1204, 2003
Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides
M Wu, NP McNulty, DA Rodionov, MS Khoroshkin, NW Griffin, J Cheng, ...
Science 350 (6256), aac5992, 2015
Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation
N Gupta, S Tanner, N Jaitly, JN Adkins, M Lipton, R Edwards, M Romine, ...
Genome research 17 (9), 1362-1377, 2007
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