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Ronaldo Junio de Oliveira
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Year
Configuration-dependent diffusion can shift the kinetic transition state and barrier height of protein folding
J Chahine, RJ Oliveira, VBP Leite, J Wang
Proceedings of the National Academy of Sciences 104 (37), 14646-14651, 2007
1312007
Topography of funneled landscapes determines the thermodynamics and kinetics of protein folding
J Wang, RJ Oliveira, X Chu, PC Whitford, J Chahine, W Han, E Wang, ...
Proceedings of the National Academy of Sciences 109 (39), 15763-15768, 2012
712012
Coordinate and time-dependent diffusion dynamics in protein folding
RJ Oliveira, PC Whitford, J Chahine, VBP Leite, J Wang
Methods 52 (1), 91-98, 2010
512010
Gold (III) complexes with ONS-Tridentate thiosemicarbazones: Toward selective trypanocidal drugs
AR Rettondin, ZA Carneiro, ACR Gonçalves, VF Ferreira, CG Oliveira, ...
European journal of medicinal chemistry 120, 217-226, 2016
502016
PtII, PdII and AuIII complexes with a thiosemicarbazone derived from diacethylmonooxime: Structural analysis, trypanocidal activity, cytotoxicity and first insight into the …
ACR Goncalves, ZA Carneiro, CG Oliveira, A Danuello, W Guerra, ...
European Journal of Medicinal Chemistry 141, 615-631, 2017
462017
The origin of nonmonotonic complex behavior and the effects of nonnative interactions on the diffusive properties of protein folding
RJ Oliveira, PC Whitford, J Chahine, J Wang, JN Onuchic, VBP Leite
Biophysical journal 99 (2), 600-608, 2010
462010
Analyzing the effect of homogeneous frustration in protein folding
VG Contessoto, DT Lima, RJ Oliveira, AT Bruni, J Chahine, VBP Leite
Proteins: Structure, Function, and Bioinformatics 81 (10), 1727-1737, 2013
402013
The characterization of a thermostable and cambialistic superoxide dismutase from Thermus filiformis
F Mandelli, JPL Franco Cairo, APS Citadini, F Büchli, TM Alvarez, ...
Letters in applied microbiology 57 (1), 40-46, 2013
342013
Configuration-dependent diffusion dynamics of downhill and two-state protein folding
W Xu, Z Lai, RJ Oliveira, VBP Leite, J Wang
The Journal of Physical Chemistry B 116 (17), 5152-5159, 2012
312012
DNA binding, cleavage, apoptosis and cytotoxicity studies of three heteroleptic nickel complexes bearing β-diketones
LM Sousa, WA Souza, DA Paixao, RB Fazzi, DY Tezuka, CD Lopes, ...
Inorganica Chimica Acta 511, 119824, 2020
292020
Supersymmetric quantum mechanics method for the Fokker–Planck equation with applications to protein folding dynamics
F Polotto, E Drigo Filho, J Chahine, RJ de Oliveira
Physica A: Statistical Mechanics and its Applications 493, 286-300, 2018
292018
In vitro anti-Trypanosoma cruzi activity of ternary copper (II) complexes and in vivo evaluation of the most promising complex
DA Paixão, CD Lopes, ZA Carneiro, LM Sousa, LP de Oliveira, NP Lopes, ...
Biomedicine & Pharmacotherapy 109, 157-166, 2019
282019
Structure and functional dynamics characterization of the ion channel of the human respiratory syncytial virus (hRSV) small hydrophobic protein (SH) transmembrane domain by …
GC Araujo, RHT Silva, LPB Scott, AS Araujo, FP Souza, RJ de Oliveira
Journal of molecular modeling 22, 1-8, 2016
282016
Quantifying nonnative interactions in the protein-folding free-energy landscape
PR Mouro, V de Godoi Contessoto, J Chahine, RJ de Oliveira, VBP Leite
Biophysical Journal 111 (2), 287-293, 2016
282016
Heterobimetallic nickel (II) and palladium (II) complexes derived from S-benzyl-N-(ferrocenyl) methylenedithiocarbazate: Trypanocidal activity and interaction with Trypanosoma …
ZA Carneiro, JC Lima, CD Lopes, APS Gaspari, S de Albuquerque, ...
European Journal of Medicinal Chemistry 180, 213-223, 2019
272019
Isolation, leishmanicidal evaluation and molecular docking simulations of piperidine alkaloids from Senna spectabilis
RBM Lacerda, TR Freitas, MM Martins, TL Teixeira, CV da Silva, ...
Bioorganic & Medicinal Chemistry 26 (22), 5816-5823, 2018
272018
Shedding light on the inhibitory mechanisms of SARS-CoV-1/CoV-2 spike proteins by ACE2-designed peptides
FC Freitas, PHB Ferreira, DC Favaro, RJ Oliveira
Journal of chemical information and modeling 61 (3), 1226-1243, 2021
252021
Ratchet, swivel, tilt and roll: a complete description of subunit rotation in the ribosome
A Hassan, S Byju, FC Freitas, C Roc, N Pender, K Nguyen, ...
Nucleic acids research 51 (2), 919-934, 2023
192023
A dynamic hydrophobic core and surface salt bridges thermostabilize a designed three-helix bundle
C Nguyen, JT Young, GG Slade, RJ Oliveira, ME McCully
Biophysical Journal 116 (4), 621-632, 2019
192019
VirB7 and VirB9 interactions are required for the assembly and antibacterial activity of a type IV secretion system
LC Oliveira, DP Souza, GU Oka, F da Silva Lima, RJ Oliveira, DC Favaro, ...
Structure 24 (10), 1707-1718, 2016
192016
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