Georgios Archontis
Georgios Archontis
Associate Professor of Theoretical and Computational Biophysics, Department of Physics, University of Cyprus
Verified email at ucy.ac.cy
Title
Cited by
Cited by
Year
CHARMM: the biomolecular simulation program
BR Brooks, CL Brooks III, AD Mackerell Jr, L Nilsson, RJ Petrella, B Roux, ...
Journal of computational chemistry 30 (10), 1545-1614, 2009
61002009
Free energy simulations come of age: Protein− ligand recognition
T Simonson, G Archontis, M Karplus
Accounts of chemical research 35 (6), 430-437, 2002
4042002
Caflisch A
BR Brooks, CL Brooks III, AD Mackerell, L Nilsson, RJ Petrella, B Roux, ...
Caves L, Cui Q, Dinner AR, Feig M, Fischer S, Gao J, Hodoscek M, Im W …, 2009
208*2009
Enthalpic contribution to protein stability: insights from atom-based calculations and statistical mechanics
T Lazaridis, G Archontis, M Karplus
Advances in protein chemistry 47, 231-306, 1995
2051995
Self-assembly of phenylalanine oligopeptides: insights from experiments and simulations
P Tamamis, L Adler-Abramovich, M Reches, K Marshall, P Sikorski, ...
Biophysical journal 96 (12), 5020-5029, 2009
1912009
Continuum Treatment of Long-Range Interactions in Free Energy Calculations. Application to Protein− Ligand Binding.
T Simonson, G Archontis, M Karplus
The Journal of Physical Chemistry B 101 (41), 8349-8362, 1997
1331997
Free energy simulations: the meaning of the individual contributions from a component analysis
S Boresch, G Archontis, M Karplus
Proteins: Structure, Function, and Bioinformatics 20 (1), 25-33, 1994
1301994
Binding free energies and free energy components from molecular dynamics and Poisson-Boltzmann calculations. Application to amino acid recognition by aspartyl-tRNA synthetase
G Archontis, T Simonson, M Karplus
Journal of molecular biology 306 (2), 307-327, 2001
1262001
A Poisson− Boltzmann study of charge insertion in an enzyme active site: the effect of dielectric relaxation
T Simonson, G Archontis, M Karplus
The Journal of Physical Chemistry B 103 (29), 6142-6156, 1999
991999
Glucose-based spiro-isoxazolines: A new family of potent glycogen phosphorylase inhibitors
M Benltifa, JM Hayes, S Vidal, D Gueyrard, PG Goekjian, JP Praly, ...
Bioorganic & medicinal chemistry 17 (20), 7368-7380, 2009
802009
Kinetics, in silico docking, molecular dynamics, and MM‐GBSA binding studies on prototype indirubins, KT5720, and staurosporine as phosphorylase kinase ATP …
JM Hayes, VT Skamnaki, G Archontis, C Lamprakis, J Sarrou, N Bischler, ...
Proteins: Structure, Function, and Bioinformatics 79 (3), 703-719, 2011
792011
Specific amino acid recognition by aspartyl-tRNA synthetase studied by free energy simulations
G Archontis, T Simonson, D Moras, M Karplus
Journal of molecular biology 275 (5), 823-846, 1998
791998
Attraction of iodide ions by the free water surface, revealed by simulations with a polarizable force field based on Drude oscillators
G Archontis, E Leontidis, G Andreou
The Journal of Physical Chemistry B 109 (38), 17957-17966, 2005
742005
Proton binding to proteins: a free-energy component analysis using a dielectric continuum model
G Archontis, T Simonson
Biophysical journal 88 (6), 3888-3904, 2005
742005
MM-GB (PB) SA calculations of protein-ligand binding free energies
JM Hayes, G Archontis
Molecular Dynamics-Studies of Synthetic and Biological Macromolecules, 171-190, 2012
732012
Crossreactivity to vinculin and microbes provides a molecular basis for HLA-based protection against rheumatoid arthritis
J Van Heemst, DTSL Jansen, S Polydorides, AK Moustakas, M Bax, ...
Nature communications 6 (1), 1-11, 2015
722015
Computational sidechain placement and protein mutagenesis with implicit solvent models
A Lopes, A Alexandrov, C Bathelt, G Archontis, T Simonson
Proteins: Structure, Function, and Bioinformatics 67 (4), 853-867, 2007
692007
Dielectric relaxation in an enzyme active site: molecular dynamics simulations interpreted with a macroscopic continuum model
G Archontis, T Simonson
Journal of the American Chemical Society 123 (44), 11047-11056, 2001
572001
Protein electron transfer: a numerical study of tunneling through fluctuating bridges
Q Xie, G Archontis, SS Skourtis
Chemical physics letters 312 (2-4), 237-246, 1999
491999
Species specificity of the complement inhibitor compstatin investigated by all‐atom molecular dynamics simulations
P Tamamis, D Morikis, CA Floudas, G Archontis
Proteins: Structure, Function, and Bioinformatics 78 (12), 2655-2667, 2010
462010
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