Daniel Zerbino
Daniel Zerbino
Mosaic Therapeutics
Verified email at mosaic-tx.com - Homepage
Cited by
Cited by
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
DR Zerbino, E Birney
Genome research 18 (5), 821-829, 2008
Comprehensive molecular characterization of human colon and rectal cancer
Cancer Genome Atlas Network
Nature 487 (7407), 330, 2012
Ensembl 2012
P Flicek, MR Amode, D Barrell, K Beal, S Brent, D Carvalho-Silva, ...
Nucleic acids research, gkr991, 2011
Comprehensive genomic characterization of squamous cell lung cancers
Cancer Genome Atlas Research Network
Nature 489 (7417), 519, 2012
Ensembl 2018
DR Zerbino, P Achuthan, W Akanni, MR Amode, D Barrell, J Bhai, K Billis, ...
Nucleic acids research 46 (D1), D754-D761, 2018
Genetic effects on gene expression across human tissues.
A Battle, CD Brown, BE Engelhardt, SB Montgomery
Nature 550 (7675), 204-213, 2017
Ensembl 2015
F Cunningham, MR Amode, D Barrell, K Beal, K Billis, S Brent, ...
Nucleic acids research 43 (D1), D662-D669, 2015
Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
MH Schulz, DR Zerbino, M Vingron, E Birney
Bioinformatics 28 (8), 1086-1092, 2012
Ensembl 2016
A Yates, W Akanni, MR Amode, D Barrell, K Billis, D Carvalho-Silva, ...
Nucleic acids research 44 (D1), D710-D716, 2016
GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
Ensembl 2020
AD Yates, P Achuthan, W Akanni, J Allen, J Allen, J Alvarez-Jarreta, ...
Nucleic acids research 48 (D1), D682-D688, 2020
Lineage-specific genome architecture links enhancers and non-coding disease variants to target gene promoters
BM Javierre, OS Burren, SP Wilder, R Kreuzhuber, SM Hill, S Sewitz, ...
Cell 167 (5), 1369-1384. e19, 2016
Ensembl 2019
F Cunningham, P Achuthan, W Akanni, J Allen, MR Amode, IM Armean, ...
Nucleic acids research 47 (D1), D745-D751, 2019
Assessment of transcript reconstruction methods for RNA-seq
T Steijger, JF Abril, PG Engstr÷m, F Kokocinski, TJ Hubbard, R Guigˇ, ...
Nature methods 10 (12), 1177-1184, 2013
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
Using the Velvet de novo Assembler for Short‐Read Sequencing Technologies
DR Zerbino
Current protocols in bioinformatics 31 (1), 11.5. 1-11.5. 12, 2010
Ensembl 2017
BL Aken, P Achuthan, W Akanni, MR Amode, F Bernsdorff, J Bhai, K Billis, ...
Nucleic acids research 45 (D1), D635-D642, 2017
Genome-Wide Association Study in Asian Populations Identifies Variants in ETS1 and WDFY4 Associated with Systemic Lupus Erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS genetics 6 (2), e1000841, 2010
The International Human Epigenome Consortium: a blueprint for scientific collaboration and discovery
HG Stunnenberg, S Abrignani, D Adams, M de Almeida, L Altucci, V Amin, ...
Cell 167 (5), 1145-1149, 2016
The ensembl regulatory build
DR Zerbino, SP Wilder, N Johnson, T Juettemann, PR Flicek
Genome biology 16 (1), 1-8, 2015
The system can't perform the operation now. Try again later.
Articles 1–20