| Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 15399 | 2019 |
| Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ... Nature biotechnology 34 (8), 828-837, 2016 | 3378 | 2016 |
| Feature-based molecular networking in the GNPS analysis environment LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ... Nature methods 17 (9), 905-908, 2020 | 897 | 2020 |
| The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition EW Deutsch, A Csordas, Z Sun, A Jarnuczak, Y Perez-Riverol, T Ternent, ... Nucleic acids research, gkw936, 2016 | 864 | 2016 |
| Qiita: rapid, web-enabled microbiome meta-analysis A Gonzalez, JA Navas-Molina, T Kosciolek, D McDonald, ... Nature methods 15 (10), 796-798, 2018 | 549 | 2018 |
| Reproducible molecular networking of untargeted mass spectrometry data using GNPS AT Aron, EC Gentry, KL McPhail, LF Nothias, M Nothias-Esposito, ... Nature protocols 15 (6), 1954-1991, 2020 | 461 | 2020 |
| Global chemical effects of the microbiome include new bile-acid conjugations RA Quinn, AV Melnik, A Vrbanac, T Fu, KA Patras, MP Christy, Z Bodai, ... Nature 579 (7797), 123-129, 2020 | 419 | 2020 |
| Molecular cartography of the human skin surface in 3D A Bouslimani, C Porto, CM Rath, M Wang, Y Guo, A Gonzalez, ... Proceedings of the National Academy of Sciences 112 (17), E2120-E2129, 2015 | 391 | 2015 |
| MolNetEnhancer: enhanced molecular networks by integrating metabolome mining and annotation tools M Ernst, KB Kang, AM Caraballo-Rodríguez, LF Nothias, J Wandy, ... Metabolites 9 (7), 144, 2019 | 325* | 2019 |
| Bioactivity-based molecular networking for the discovery of drug leads in natural product bioassay-guided fractionation LF Nothias, M Nothias-Esposito, R Da Silva, M Wang, I Protsyuk, Z Zhang, ... Journal of natural products 81 (4), 758-767, 2018 | 325 | 2018 |
| The natural products atlas: an open access knowledge base for microbial natural products discovery JA Van Santen, G Jacob, AL Singh, V Aniebok, MJ Balunas, D Bunsko, ... ACS central science 5 (11), 1824-1833, 2019 | 324 | 2019 |
| Propagating annotations of molecular networks using in silico fragmentation RR da Silva, M Wang, LF Nothias, JJJ van der Hooft, ... PLoS computational biology 14 (4), e1006089, 2018 | 308 | 2018 |
| Integrative analysis of multimodal mass spectrometry data in MZmine 3 R Schmid, S Heuckeroth, A Korf, A Smirnov, O Myers, TS Dyrlund, ... Nature biotechnology 41 (4), 447-449, 2023 | 254 | 2023 |
| Learning representations of microbe–metabolite interactions JT Morton, AA Aksenov, LF Nothias, JR Foulds, RA Quinn, MH Badri, ... Nature methods 16 (12), 1306-1314, 2019 | 249 | 2019 |
| Mass spectrometry searches using MASST M Wang, AK Jarmusch, F Vargas, AA Aksenov, JM Gauglitz, K Weldon, ... Nature biotechnology 38 (1), 23-26, 2020 | 208 | 2020 |
| Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species KR Duncan, M Crüsemann, A Lechner, A Sarkar, J Li, N Ziemert, M Wang, ... Chemistry & biology 22 (4), 460-471, 2015 | 205 | 2015 |
| NPClassifier: a deep neural network-based structural classification tool for natural products HW Kim, M Wang, CA Leber, LF Nothias, R Reher, KB Kang, ... Journal of Natural Products 84 (11), 2795-2807, 2021 | 192 | 2021 |
| Significance estimation for large scale metabolomics annotations by spectral matching K Scheubert, F Hufsky, D Petras, M Wang, LF Nothias, K Dührkop, ... Nature Communications 8 (1), 1494, 2017 | 186 | 2017 |
| Discovering and linking public omics data sets using the Omics Discovery Index Y Perez-Riverol, M Bai, F da Veiga Leprevost, S Squizzato, YM Park, ... Nature biotechnology 35 (5), 406-409, 2017 | 178 | 2017 |
| Assembling the community-scale discoverable human proteome M Wang, J Wang, J Carver, BS Pullman, SW Cha, N Bandeira Cell systems 7 (4), 412-421. e5, 2018 | 170 | 2018 |
Pieter C DorresteinUCSDE-mail confirmado em ucsd.edu
