| Resolving lipid mediators maresin 1 and resolvin D2 prevent atheroprogression in mice JR Viola, P Lemnitzer, Y Jansen, G Csaba, C Winter, C Neideck, ... Circulation research 119 (9), 1030-1038, 2016 | 200 | 2016 |
| Alternative splicing and protein structure evolution F Birzele, G Csaba, R Zimmer Nucleic acids research 36 (2), 550-558, 2008 | 136 | 2008 |
| Systematic comparison of SCOP and CATH: a new gold standard for protein structure analysis G Csaba, F Birzele, R Zimmer BMC structural biology 9, 1-11, 2009 | 108 | 2009 |
| Toward a gold standard for benchmarking gene set enrichment analysis L Geistlinger, G Csaba, M Santarelli, M Ramos, L Schiffer, N Turaga, ... Briefings in bioinformatics 22 (1), 545-556, 2021 | 102 | 2021 |
| miRSel: automated extraction of associations between microRNAs and genes from the biomedical literature H Naeem, R Küffner, G Csaba, R Zimmer BMC bioinformatics 11, 1-8, 2010 | 95 | 2010 |
| The heat shock response in yeast maintains protein homeostasis by chaperoning and replenishing proteins M Mühlhofer, E Berchtold, CG Stratil, G Csaba, E Kunold, NC Bach, ... Cell reports 29 (13), 4593-4607. e8, 2019 | 93 | 2019 |
| From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems L Geistlinger, G Csaba, R Küffner, N Mulder, R Zimmer Bioinformatics 27 (13), i366-i373, 2011 | 81 | 2011 |
| Vorolign—fast structural alignment using Voronoi contacts F Birzele, JE Gewehr, G Csaba, R Zimmer Bioinformatics 23 (2), e205-e211, 2007 | 79 | 2007 |
| Bioconductor’s EnrichmentBrowser: seamless navigation through combined results of set-& network-based enrichment analysis L Geistlinger, G Csaba, R Zimmer BMC bioinformatics 17, 1-11, 2016 | 77 | 2016 |
| ContextMap 2: fast and accurate context-based RNA-seq mapping T Bonfert, E Kirner, G Csaba, R Zimmer, CC Friedel BMC bioinformatics 16, 1-15, 2015 | 70 | 2015 |
| miR-103 promotes endothelial maladaptation by targeting lncWDR59 L Natarelli, C Geißler, G Csaba, Y Wei, M Zhu, A di Francesco, ... Nature communications 9 (1), 2645, 2018 | 65 | 2018 |
| Protein structure alignment considering phenotypic plasticity G Csaba, F Birzele, R Zimmer Bioinformatics 24 (16), i98-i104, 2008 | 57 | 2008 |
| Alternative Splicing in Next Generation Sequencing Data of Saccharomyces cerevisiae K Schreiber, G Csaba, M Haslbeck, R Zimmer PLoS One 10 (10), e0140487, 2015 | 51 | 2015 |
| A comprehensive gene regulatory network for the diauxic shift in Saccharomyces cerevisiae L Geistlinger, G Csaba, S Dirmeier, R Küffner, R Zimmer Nucleic acids research 41 (18), 8452-8463, 2013 | 30 | 2013 |
| Ms-empire utilizes peptide-level noise distributions for ultra-sensitive detection of differentially expressed proteins [s] C Ammar, M Gruber, G Csaba, R Zimmer Molecular & Cellular Proteomics 18 (9), 1880-1892, 2019 | 28 | 2019 |
| A context-based approach to identify the most likely mapping for RNA-seq experiments T Bonfert, G Csaba, R Zimmer, CC Friedel BMC bioinformatics 13, 1-11, 2012 | 27 | 2012 |
| A transcriptional response of Clostridium beijerinckii NRRL B-598 to a butanol shock K Sedlar, J Kolek, M Gruber, K Jureckova, B Branska, G Csaba, ... Biotechnology for biofuels 12, 1-16, 2019 | 20 | 2019 |
| Mining RNA–seq data for infections and contaminations T Bonfert, G Csaba, R Zimmer, CC Friedel PLoS One 8 (9), e73071, 2013 | 17 | 2013 |
| Human genetic defects in SRP19 and SRPRA cause severe congenital neutropenia with distinctive proteome changes MI Linder, Y Mizoguchi, S Hesse, G Csaba, M Tatematsu, M Łyszkiewicz, ... Blood 141 (6), 645-658, 2023 | 12 | 2023 |
| Multi-reference spectral library yields almost complete coverage of heterogeneous LC-MS/MS data sets C Ammar, E Berchtold, G Csaba, A Schmidt, A Imhof, R Zimmer Journal of proteome research 18 (4), 1553-1566, 2019 | 10 | 2019 |
