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Deyvid Amgarten
Deyvid Amgarten
Bioinformatics scientist, Hospital Albert Einstein
Verified email at einstein.br - Homepage
Title
Cited by
Cited by
Year
MARVEL, a tool for prediction of bacteriophage sequences in metagenomic bins
D Amgarten, LPP Braga, AM Da Silva, JC Setubal
Frontiers in genetics 9, 397865, 2018
1532018
SARS-CoV-2 isolation from the first reported patients in Brazil and establishment of a coordinated task network
DB Araujo, RRG Machado, DE Amgarten, FM Malta, GG de Araujo, ...
Memórias do Instituto Oswaldo Cruz 115, 2020
1132020
Bacterial diversification in the light of the interactions with phages: the genetic symbionts and their role in ecological speciation
LPP Braga, SM Soucy, DE Amgarten, AM Da Silva, JC Setubal
Frontiers in Ecology and Evolution 6, 6, 2018
402018
Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages
D Amgarten, LF Martins, KC Lombardi, LP Antunes, APS de Souza, ...
BMC genomics 18, 1-18, 2017
292017
Effectiveness of heterologous coronavirus disease 2019 (COVID-19) vaccine booster dosing in Brazilian healthcare workers, 2021
AR Marra, JL Miraglia, DT Malheiros, Y Guozhang, VD Teich, ...
Clinical infectious diseases 76 (3), e360-e366, 2023
262023
Sabiá Virus–Like Mammarenavirus in Patient with Fatal Hemorrhagic Fever, Brazil, 2020
F de Mello Malta, D Amgarten, ACSS Nastri, YL Ho, LVB Casadio, ...
Emerging infectious diseases 26 (6), 1332, 2020
222020
Mass molecular testing for COVID19 using NGS-based technology and a highly scalable workflow
F de Mello Malta, D Amgarten, FC Val, MC Cervato, BMC de Azevedo, ...
Scientific reports 11 (1), 7122, 2021
152021
Risk factors for long coronavirus disease 2019 (long COVID) among healthcare personnel, Brazil, 2020–2022
AR Marra, VS Sampaio, MC Ozahata, R Lopes, AF Brito, M Bragatte, ...
Infection Control & Hospital Epidemiology 44 (12), 1972-1978, 2023
142023
vHULK, a new tool for bacteriophage host prediction based on annotated genomic features and deep neural networks
D Amgarten, BKV Iha, CM Piroupo, AM Da Silva, JC Setubal
bioRxiv, 2020.12. 06.413476, 2020
142020
vHULK, a new tool for bacteriophage host prediction based on annotated genomic features and neural networks
D Amgarten, BKV Iha, CM Piroupo, AM da Silva, JC Setubal
PHAGE 3 (4), 204-212, 2022
82022
Malta FdM, de Araujo GG, Monteiro CO, Candido ED, Soares CP, de Menezes FG, Pires ACC, et al. SARS-CoV-2 isolation from the first reported patients in Brazil and establishment …
DB Araujo, RRG Machado, DE Amgarten
Mem. Inst. Oswaldo Cruz 115, e200342, 2020
82020
Effectiveness of two COVID-19 vaccines (viral vector and inactivated viral vaccine) against SARS-CoV-2 infection in a cohort of healthcare workers.
AR Marra, JL Miraglia, DT Malheiros, Y Guozhang, VD Teich, ...
Infect Control Hosp Epidemiol, 1-20, 2022
72022
Novel virocell metabolic potential revealed in agricultural soils by virus‐enriched soil metagenome analysis
LPP Braga, FH Coutinho, DE Amgarten, W Kot, L Hansen, JC Setubal, ...
Environmental microbiology reports 13 (3), 348-354, 2021
72021
First report and genetic characterization of the highly pathogenic avian influenza A (H5N1) virus in Cabot's tern (Thalasseus acuflavidus), Brazil
D Reischak, AV Rivetti Jr, JNP Otaka, CS Domingues, T de Lima Freitas, ...
Veterinary and Animal Science 22, 100319, 2023
52023
Detection of Hepatitis E Virus Genotype 3 in Feces of Capybaras (Hydrochoeris hydrochaeris) in Brazil
L Cunha, A Luchs, LS Azevedo, VCM Silva, MF Lemos, AC Costa, ...
Viruses 15 (2), 335, 2023
52023
Effectiveness of two coronavirus disease 2019 (COVID-19) vaccines (viral vector and inactivated viral vaccine) against severe acute respiratory coronavirus virus 2 (SARS-CoV-2 …
AR Marra, JL Miraglia, DT Malheiros, Y Guozhang, VD Teich, ...
Infection Control & Hospital Epidemiology 44 (1), 75-81, 2023
42023
MARVEL, a tool for prediction of bacteriophage sequences in metagenomic bins. Front Genet. 2018; 9: 304
D Amgarten, LPP Braga, AM da Silva, JC Setubal
42018
Risk factors for long COVID among healthcare workers, Brazil, 2020–2022
AR Marra, VS Sampaio, MC Ozahata, RLP da Silva, A Brito, M Bragatte, ...
medRxiv, 2023.01. 03.22284043, 2023
32023
Nucleocapsid single point-mutation associated with drop-out on RT-PCR assay for SARS-CoV-2 detection
F de Mello Malta, D Amgarten, AR Marra, RC Petroni, LH da Silva Nali, ...
BMC Infectious Diseases 23 (1), 714, 2023
22023
Mortality in Sea Lions is associated with the introduction of the H5N1 clade 2.3. 4.4 b virus in Brazil, October 2023: Whole genome sequencing and phylogenetic analysis
AC Araújo, AY Cho, LMN Silva, TC Corrêa, GC Souza, AS Albuquerque, ...
12023
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