Eduardo Gade Gusmao
Eduardo Gade Gusmao
Universitätsmedizin Göttingen - Institut für Pathologie
Verified email at med.uni-goettingen.de - Homepage
Title
Cited by
Cited by
Year
Analysis of computational footprinting methods for DNase sequencing experiments
EG Gusmao, M Allhoff, M Zenke, IG Costa
Nature methods 13 (4), 303-309, 2016
732016
Detection of active transcription factor binding sites with the combination of DNase hypersensitivity and histone modifications
EG Gusmao, C Dieterich, M Zenke, IG Costa
Bioinformatics 30 (22), 3143-3151, 2014
502014
Replicative senescence is associated with nuclear reorganization and with DNA methylation at specific transcription factor binding sites
S Hänzelmann, F Beier, EG Gusmao, CM Koch, S Hummel, I Charapitsa, ...
Clinical epigenetics 7 (1), 19, 2015
472015
The interaction of MYC with the trithorax protein ASH2L promotes gene transcription by regulating H3K27 modification
A Ullius, J Lüscher-Firzlaff, IG Costa, G Walsemann, AH Forst, ...
Nucleic acids research 42 (11), 6901-6920, 2014
332014
HMGB2 loss upon senescence entry disrupts genomic organization and induces CTCF clustering across cell types
A Zirkel, M Nikolic, K Sofiadis, JP Mallm, CA Brackley, H Gothe, ...
Molecular cell 70 (4), 730-744. e6, 2018
312018
Epigenetic program and transcription factor circuitry of dendritic cell development
Q Lin, H Chauvistré, IG Costa, EG Gusmao, S Mitzka, S Hänzelmann, ...
Nucleic acids research 43 (20), 9680-9693, 2015
232015
Binding of nuclear factor κB to noncanonical consensus sites reveals its multimodal role during the early inflammatory response
P Kolovos, T Georgomanolis, A Koeferle, JD Larkin, L Brant, M Nikolicć, ...
Genome research 26 (11), 1478-1489, 2016
22*2016
Mtss1 is a critical epigenetically regulated tumor suppressor in CML
M Schemionek, O Herrmann, MM Reher, N Chatain, C Schubert, IG Costa, ...
Leukemia 30 (4), 823-832, 2016
202016
Spatial chromosome folding and active transcription drive DNA fragility and formation of oncogenic MLL translocations
HJ Gothe, BAM Bouwman, EG Gusmao, R Piccinno, G Petrosino, ...
Molecular cell 75 (2), 267-283. e12, 2019
192019
Results of a randomized, prospective clinical trial evaluating metronomic chemotherapy in nonmetastatic patients with high‐grade, operable osteosarcomas of the extremities: A …
AA Senerchia, CR Macedo, S Ferman, M Scopinaro, W Cacciavillano, ...
Cancer 123 (6), 1003-1010, 2017
192017
Sox5 regulates beta-cell phenotype and is reduced in type 2 diabetes
AS Axelsson, T Mahdi, HA Nenonen, T Singh, S Hänzelmann, A Wendt, ...
Nature communications 8 (1), 1-16, 2017
142017
Issues on sampling negative examples for predicting prokaryotic promoters
EG Gusmäo, MCP de Souto
2014 International Joint Conference on Neural Networks (IJCNN), 494-501, 2014
32014
Prediction of transcription factor binding sites by integrating dnase digestion and histone modification
EG Gusmao, C Dieterich, IG Costa
Brazilian Symposium on Bioinformatics, 109-119, 2012
32012
iHi-C 2.0: A simple approach for mapping native spatial chromatin organisation from low cell numbers
A Mizi, EG Gusmao, A Papantonis
Methods 170, 33-37, 2020
22020
Redundant and specific roles of cohesin STAG subunits in chromatin looping and transcription control
V Casa, MM Gines, EG Gusmao, JA Slotman, A Zirkel, N Josipovic, E Oole, ...
bioRxiv, 642959, 2019
22019
A case-control study of non-parametric approaches for detecting snp-snp interactions
FRB de Araújo, EG Gusmao, KS Guimaraes
2011 30th International Conference of the Chilean Computer Science Society …, 2011
22011
Overarching control of autophagy and DNA damage response by CHD6 revealed by modeling a rare human pathology
Y Kargapolova, R Rehimi, H Kayserili, J Brühl, A Zirkel, Y Li, G Yigit, ...
bioRxiv, 2020
2020
HMGB1 as a rheostat of chromatin topology and RNA homeostasis on the path to senescence
K Sofiadis, M Nikolic, A Zirkel, Y Kargapolova, N Josipovic, A Papadakis, ...
bioRxiv, 540146, 2019
2019
Computational Footprinting Methods for Next-Generation Sequencing Experiments
MSEG Gusmao, SJ Decker, M Zenke, T Berlage
Fachgruppe Informatik, 2017
2017
HINT-BC–HMM-based Identification of Transcription Factor Footprints on Bias-Corrected DNase-seq Data
EG Gusmao, M Zenke, IG Costa
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Articles 1–20