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Ian Fiddes
Ian Fiddes
10x Genomics
Verified email at 10xgenomics.com
Title
Cited by
Cited by
Year
GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
25662019
Nanopore sequencing and assembly of a human genome with ultra-long reads
M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ...
Nature biotechnology 36 (4), 338-345, 2018
18392018
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
17512022
Improved data analysis for the MinION nanopore sequencer
M Jain, IT Fiddes, KH Miga, HE Olsen, B Paten, M Akeson
Nature methods 12 (4), 351-356, 2015
7762015
GENCODE 2021
A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ...
Nucleic acids research 49 (D1), D916-D923, 2021
7122021
Comprehensive molecular characterization of pheochromocytoma and paraganglioma
L Fishbein, I Leshchiner, V Walter, L Danilova, AG Robertson, ...
Cancer cell 31 (2), 181-193, 2017
6242017
The UCSC genome browser database: 2018 update
J Casper, AS Zweig, C Villarreal, C Tyner, ML Speir, KR Rosenbloom, ...
Nucleic acids research 46 (D1), D762-D769, 2018
5002018
Human-specific NOTCH2NL genes affect notch signaling and cortical neurogenesis
IT Fiddes, GA Lodewijk, M Mooring, CM Bosworth, AD Ewing, ...
Cell 173 (6), 1356-1369. e22, 2018
4632018
Establishing cerebral organoids as models of human-specific brain evolution
AA Pollen, A Bhaduri, MG Andrews, TJ Nowakowski, OS Meyerson, ...
Cell 176 (4), 743-756. e17, 2019
4532019
High-resolution comparative analysis of great ape genomes
ZN Kronenberg, IT Fiddes, D Gordon, S Murali, S Cantsilieris, ...
Science 360 (6393), eaar6343, 2018
3632018
Long-read sequence assembly of the gorilla genome
D Gordon, J Huddleston, MJP Chaisson, CM Hill, ZN Kronenberg, ...
Science 352 (6281), aae0344, 2016
3452016
Progressive Cactus is a multiple-genome aligner for the thousand-genome era
J Armstrong, G Hickey, M Diekhans, IT Fiddes, AM Novak, A Deran, ...
Nature 587 (7833), 246-251, 2020
2772020
A robust benchmark for detection of germline large deletions and insertions
JM Zook, NF Hansen, ND Olson, L Chapman, JC Mullikin, C Xiao, ...
Nature biotechnology 38 (11), 1347-1355, 2020
2692020
Combinatorial single-cell CRISPR screens by direct guide RNA capture and targeted sequencing
JM Replogle, TM Norman, A Xu, JA Hussmann, J Chen, JZ Cogan, ...
Nature biotechnology 38 (8), 954-961, 2020
2562020
A comparative genomics multitool for scientific discovery and conservation
Nature 587 (7833), 240-245, 2020
2182020
Improved reference genome for the domestic horse increases assembly contiguity and composition
TS Kalbfleisch, ES Rice, MS DePriest Jr, BP Walenz, MS Hestand, ...
Communications biology 1 (1), 197, 2018
2092018
Resolving the full spectrum of human genome variation using Linked-Reads
P Marks, S Garcia, AM Barrio, K Belhocine, J Bernate, R Bharadwaj, ...
Genome research 29 (4), 635-645, 2019
2052019
Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci
J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, ...
Nature genetics 50 (11), 1574-1583, 2018
1872018
A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing
AA Petti, SR Williams, CA Miller, IT Fiddes, SN Srivatsan, DY Chen, ...
Nature communications 10 (1), 3660, 2019
1842019
Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification
S Reischauer, OA Stone, A Villasenor, N Chi, SW Jin, M Martin, MT Lee, ...
Nature 535 (7611), 294-298, 2016
1492016
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