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Alessandro M. Varani
Alessandro M. Varani
UNESP - Sao Paulo State University
E-mail confirmado em unesp.br - Página inicial
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ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes
AM Varani, P Siguier, E Gourbeyre, V Charneau, M Chandler
Genome biology 12, 1-9, 2011
3312011
Insertion Sequence IS26 Reorganizes Plasmids in Clinically Isolated Multidrug-Resistant Bacteria by Replicative Transposition
S He, AB Hickman, AM Varani, P Siguier, M Chandler, JP Dekker, F Dyda
MBio 6 (3), 10.1128/mbio. 00762-15, 2015
2642015
Everyman's guide to bacterial insertion sequences
P Siguier, E Gourbeyre, A Varani, B Ton-Hoang, M Chandler
Mobile DNA Iii, 555-590, 2015
230*2015
Building the sugarcane genome for biotechnology and identifying evolutionary trends
N De Setta, CB Monteiro-Vitorello, CJ Metcalfe, GMQ Cruz, LE Del Bem, ...
BMC genomics 15, 1-18, 2014
1402014
A Metagenomic Approach to Cyanobacterial Genomics
DO Alvarenga, MF Fiore, AM Varani
Frontiers in Microbiology, 2017
1092017
The Family Bradyrhizobiaceae. U: The Prokaryotes: Alphaproteobacteria and Betaproteobacteria (Rosenberg E. I sur., Ur.)
JA Marcondes De Souza, LM Carareto Alves, A de Mello Varani, ...
Springer Verlag, Berlin, 2014
86*2014
The Family Rhizobiaceae
EGML Lucia Maria Carrareto Alves, Jackson Antônio Marcondes de Souza ...
The Prokaryotes: Alphaproteobacteria and Betaproteobacteria, 419-437, 2014
84*2014
Genomic signatures and co‐occurrence patterns of the ultra‐small Saccharimonadia (phylum CPR/Patescibacteria) suggest a symbiotic lifestyle
LN Lemos, JD Medeiros, F Dini‐Andreote, GR Fernandes, AM Varani, ...
Molecular ecology 28 (18), 4259-4271, 2019
832019
The role of prophage in plant-pathogenic bacteria
AM Varani, CB Monteiro-Vitorello, HI Nakaya, MA Van Sluys
Annual review of phytopathology 51, 429-451, 2013
762013
Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments
P Siguier, A Varani, J Perochon, M Chandler
Mobile Genetic Elements: Protocols and Genomic Applications, 91-103, 2012
762012
The Chloroplast Genome of Passiflora edulis (Passifloraceae) Assembled from Long Sequence Reads: Structural Organization and Phylogenomic Studies in …
LA Cauz-Santos, CF Munhoz, N Rodde, S Cauet, AA Santos, HA Penha, ...
Frontiers in Plant Science 8, 334, 2017
732017
Laterally transferred genomic islands in Xanthomonadales related to pathogenicity and primary metabolism
WC Lima, ACM Paquola, AM Varani, MA Van Sluys, CFM Menck
FEMS microbiology letters 281 (1), 87-97, 2008
682008
The IS6 family, a clinically important group of insertion sequences including IS26
A Varani, S He, P Siguier, K Ross, M Chandler
Mobile Dna 12, 1-18, 2021
662021
Xylella and Xanthomonas Mobil'omics
CB Monteiro-Vitorello, MC De Oliveira, MM Zerillo, AM Varani, E Civerolo, ...
Omics: a journal of integrative biology 9 (2), 146-159, 2005
662005
TnCentral: a Prokaryotic Transposable Element Database and Web Portal for Transposon Analysis
CM Ross K, Varani AM, Snesrud E, Huang H, Alvarenga DO, Zhang J, Wu C, McGann P
mBio 12 (Number 5), e02060-21, 2021
65*2021
Origins of the Xylella fastidiosa Prophage-Like Regions and Their Impact in Genome Differentiation
A de Mello Varani, RC Souza, HI Nakaya, WC de Lima, ...
PLoS One 3 (12), e4059, 2008
632008
Phylogenetic and antimicrobial resistance gene analysis of Salmonella Typhimurium strains isolated in Brazil by whole genome sequencing
JPF Fernanda Almeida , Amanda Aparecida Seribelli, Marta Inês Cazentini ...
PLoS ONE 13 ((8)e0201882), 16, 2018
62*2018
NAD biosynthesis evolution in bacteria: lateral gene transfer of kynurenine pathway in Xanthomonadales and Flavobacteriales
WC Lima, AM Varani, CFM Menck
Molecular biology and evolution 26 (2), 399-406, 2009
612009
Mechanisms of evolution in high-consequence drug resistance plasmids
S He, M Chandler, AM Varani, AB Hickman, JP Dekker, F Dyda
MBio 7 (6), 10.1128/mbio. 01987-16, 2016
582016
The Chloroplast Genome of Utricularia reniformis Sheds Light on the Evolution of the ndh Gene Complex of Terrestrial Carnivorous Plants from the …
SR Silva, YCA Diaz, HA Penha, DG Pinheiro, CC Fernandes, ...
PLoS One 11 (10), e0165176, 2016
572016
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