Vincent Miele
Vincent Miele
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Statistical clustering of temporal networks through a dynamic stochastic block model
C Matias, V Miele
Journal of the Royal Statistical Society: Series B (Statistical Methodology), 2017
Ultra-fast sequence clustering from similarity networks with SiLiX
V Miele, S Penel, L Duret
BMC bioinformatics 12, 1-9, 2011
How structured is the entangled bank? The surprisingly simple organization of multiplex ecological networks leads to increased persistence and resilience
S Kéfi, V Miele, EA Wieters, SA Navarrete, EL Berlow
PLoS biology 14 (8), e1002527, 2016
DNA physical properties determine nucleosome occupancy from yeast to fly
V Miele, C Vaillant, Y d'Aubenton-Carafa, C Thermes, T Grange
Nucleic acids research 36 (11), 3746-3756, 2008
Fast online graph clustering via Erdős–Rényi mixture
H Zanghi, C Ambroise, V Miele
Pattern recognition 41 (12), 3592-3599, 2008
Diversity indices for ecological networks: a unifying framework using Hill numbers
M Ohlmann, V Miele, S Dray, L Chalmandrier, L O’Connor, W Thuiller
Ecology Letters, 2019
Core–periphery dynamics in a plant–pollinator network
V Miele, R Ramos‐Jiliberto, DP Vázquez
Journal of Animal Ecology, 2020
Deciphering the connectivity structure of biological networks using MixNet
F Picard, V Miele, JJ Daudin, L Cottret, S Robin
BMC bioinformatics 10, 1-11, 2009
Global survey of mobile DNA horizontal transfer in arthropods reveals Lepidoptera as a prime hotspot
D Reiss, G Mialdea, V Miele, DM de Vienne, J Peccoud, C Gilbert, L Duret, ...
PLoS genetics 15 (2), e1007965, 2019
High-quality sequence clustering guided by network topology and multiple alignment likelihood
V Miele, S Penel, V Daubin, F Picard, D Kahn, L Duret
Bioinformatics 28 (8), 1078-1085, 2012
Ecological networks to unravel the routes to horizontal transposon transfers
S Venner, V Miele, C Terzian, C Biémont, V Daubin, C Feschotte, ...
PLoS biology 15 (2), e2001536, 2017
Revisiting animal photo‐identification using deep metric learning and network analysis
V Miele, G Dussert, B Spataro, S Chamaillé-Jammes, D Allainé, ...
Methods in Ecology and Evolution, 2021
Fruiting strategies of perennial plants: a resource budget model to couple mast seeding to pollination efficiency and resource allocation strategies
S Venner, A Siberchicot, PF Pélisson, E Schermer, MC Bel-Venner, ...
The American Naturalist 188 (1), 66-75, 2016
Strategies for online inference of model-based clustering in large and growing networks
H Zanghi, F Picard, V Miele, C Ambroise
Non-trophic interactions strengthen the diversity—functioning relationship in an ecological bioenergetic network model
V Miele, C Guill, R Ramos-Jiliberto, S Kéfi
PLoS computational biology 15 (8), e1007269, 2019
Nine quick tips for analyzing network data
V Miele, C Matias, S Robin, S Dray
PLOS Computational Biology 15 (12), e1007434, 2019
Spatially constrained clustering of ecological networks
V Miele, F Picard, S Dray
Methods in Ecology and Evolution 5 (8), 771-779, 2014
DNA physical properties and nucleosome positions are major determinants of HIV-1 integrase selectivity
M Naughtin, Z Haftek-Terreau, J Xavier, S Meyer, M Silvain, ...
PloS one 10 (6), e0129427, 2015
Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads
L Lima, B Sinaimeri, G Sacomoto, H Lopez-Maestre, C Marchet, V Miele, ...
Algorithms for molecular biology 12, 1-19, 2017
Revealing the hidden structure of dynamic ecological networks
V Miele, C Matias
Royal Society open science 4 (6), 170251, 2017
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