Juliana Fischer
Juliana Fischer
Instituto Carlos Chagas
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Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0
PC Carvalho, DB Lima, FV Leprevost, MDM Santos, JSG Fischer, ...
Nature protocols 11 (1), 102-117, 2016
PatternLab for proteomics: a tool for differential shotgun proteomics
PC Carvalho, JSG Fischer, EI Chen, JR Yates, VC Barbosa
BMC bioinformatics 9, 1-14, 2008
Preliminary results from a phase I/II study of perillyl alcohol intranasal administration in adults with recurrent malignant gliomas
CO Da Fonseca, G Schwartsmann, J Fischer, J Nagel, D Futuro, ...
Surgical neurology 70 (3), 259-266, 2008
Search engine processor: filtering and organizing peptide spectrum matches
PC Carvalho, JSG Fischer, T Xu, D Cociorva, TS Balbuena, RH Valente, ...
Proteomics 12 (7), 944-949, 2012
PatternLab: from mass spectra to label‐free differential shotgun proteomics
PC Carvalho, JSG Fischer, T Xu, JR Yates III, VC Barbosa
Current Protocols in Bioinformatics 40 (1), 13.19. 1-13.19. 18, 2012
Long-term outcome in patients with recurrent malignant glioma treated with Perillyl alcohol inhalation
CO Da Fonseca, RM Teixeira, JCT Silva, JDESDAG Fischer, OC Meirelles, ...
Anticancer research 33 (12), 5625-5631, 2013
Characterization of homodimer interfaces with cross-linking mass spectrometry and isotopically labeled proteins
DB Lima, JT Melchior, J Morris, VC Barbosa, J Chamot-Rooke, ...
Nature protocols 13 (3), 431-458, 2018
GO Explorer: a gene-ontology tool to aid in the interpretation of shotgun proteomics data
PC Carvalho, JSG Fischer, EI Chen, GB Domont, MGC Carvalho, ...
Proteome Science 7, 1-11, 2009
Simple, efficient and thorough shotgun proteomic analysis with PatternLab V
MDM Santos, DB Lima, JSG Fischer, MA Clasen, LU Kurt, ...
Nature protocols 17 (7), 1553-1578, 2022
Are gastric cancer resection margin proteomic profiles more similar to those from controls or tumors?
PF Aquino, JSG Fischer, AGC Neves-Ferreira, J Perales, GB Domont, ...
Journal of proteome research 11 (12), 5836-5842, 2012
Dynamic proteomic overview of glioblastoma cells (A172) exposed to perillyl alcohol
JS da Gama Fischer, L Liao, PC Carvalho, VC Barbosa, GB Domont, ...
Journal of proteomics 73 (5), 1018-1027, 2010
A multi-protease, multi-dissociation, bottom-up-to-top-down proteomic view of the Loxosceles intermedia venom
D Trevisan-Silva, AV Bednaski, JSG Fischer, SS Veiga, N Bandeira, ...
Scientific data 4 (1), 1-7, 2017
Chemo-resistant protein expression pattern of glioblastoma cells (A172) to perillyl alcohol
J de Saldanha da Gama Fischer, P Costa Carvalho, CO da Fonseca, ...
Journal of proteome research 10 (1), 153-160, 2011
Proteomic Profiling of the Influence of Iron Availability on Cryptococcus gattii
J Crestani, PC Carvalho, X Han, A Seixas, L Broetto, JSG Fischer, ...
Journal of proteome research 11 (1), 189-205, 2012
Epstein-Barr virus DNA associated with gastric adenocarcinoma and adjacent non-cancerous mucosa in patients from Manaus, Brazil
PF De Aquino, PC Carvalho, JS da Gama Fischer, AQ de Souza, ...
Genet Mol Res 11 (4), 4442-6, 2012
Exploring the proteomic landscape of a gastric cancer biopsy with the shotgun imaging analyzer
PF Aquino, DB Lima, J de Saldanha da Gama Fischer, RD Melani, ...
Journal of proteome research 13 (1), 314-320, 2014
Analyzing marginal cases in differential shotgun proteomics
PC Carvalho, JSG Fischer, J Perales, JR Yates, VC Barbosa, ...
Bioinformatics 27 (2), 275-276, 2011
Anti-thrombin as a prognostic biomarker candidate for patients with recurrent glioblastoma multiform under treatment with perillyl alcohol
JS da Gama Fischer, PC Carvalho, AG da Costa Neves-Ferreira, ...
J. Exp. Oncol 7, 285-290, 2008
Comparing intestinal versus diffuse gastric cancer using a PEFF-oriented proteomic pipeline
HH Wippel, MDM Santos, MA Clasen, LU Kurt, FCS Nogueira, ...
Journal of proteomics 171, 63-72, 2018
A time-based and intratumoral proteomic assessment of a recurrent glioblastoma multiforme
PF De Aquino, PC Carvalho, FCS Nogueira, CO Da Fonseca, ...
Frontiers in Oncology 6, 183, 2016
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