Conservation of complex knotting and slipknotting patterns in proteins JI Sułkowska, EJ Rawdon, KC Millett, JN Onuchic, A Stasiak Proceedings of the National Academy of Sciences 109 (26), E1715-E1723, 2012 | 224 | 2012 |
KnotProt: a database of proteins with knots and slipknots M Jamroz, W Niemyska, EJ Rawdon, A Stasiak, KC Millett, P Sułkowski, ... Nucleic acids research 43 (D1), D306-D314, 2015 | 173 | 2015 |
Thickness of knots RA Litherland, J Simon, O Durumeric, E Rawdon Topology and its Applications 91 (3), 233-244, 1999 | 160 | 1999 |
Effect of knotting on the shape of polymers EJ Rawdon, JC Kern, M Piatek, P Plunkett, A Stasiak, KC Millett Macromolecules 41 (21), 8281-8287, 2008 | 114 | 2008 |
Identifying knots in proteins KC Millett, EJ Rawdon, A Stasiak, JI Sułkowska Biochemical Society Transactions 41 (2), 533-537, 2013 | 74 | 2013 |
Bending modes of DNA directly addressed by cryo-electron microscopy of DNA minicircles D Demurtas, A Amzallag, EJ Rawdon, JH Maddocks, J Dubochet, ... Nucleic acids research 37 (9), 2882-2893, 2009 | 61 | 2009 |
Knot tightening by constrained gradient descent T Ashton, J Cantarella, M Piatek, EJ Rawdon Experimental Mathematics 20 (1), 57-90, 2011 | 60 | 2011 |
KnotProt 2.0: a database of proteins with knots and other entangled structures P Dabrowski-Tumanski, P Rubach, D Goundaroulis, J Dorier, P Sułkowski, ... Nucleic acids research 47 (D1), D367-D375, 2019 | 55 | 2019 |
Knotting pathways in proteins JI Sułkowska, JK Noel, CA Ramírez-Sarmiento, EJ Rawdon, KC Millett, ... Biochemical Society Transactions 41 (2), 523-527, 2013 | 52 | 2013 |
Energy, ropelength, and other physical aspects of equilateral knots KC Millett, EJ Rawdon Journal of Computational Physics 186 (2), 426-456, 2003 | 43 | 2003 |
Approximating the thickness of a knot EJ Rawdon Ideal knots, 143-150, 1998 | 40 | 1998 |
Approximating smooth thickness EJ Rawdon Journal of Knot Theory and Its Ramifications 9 (01), 113-145, 2000 | 39 | 2000 |
LinkProt: a database collecting information about biological links P Dabrowski-Tumanski, AI Jarmolinska, W Niemyska, EJ Rawdon, ... Nucleic acids research, gkw976, 2016 | 37 | 2016 |
Can computers discover ideal knots? EJ Rawdon Experimental Mathematics 12 (3), 287-302, 2003 | 37 | 2003 |
Scaling behavior and equilibrium lengths of knotted polymers E Rawdon, A Dobay, JC Kern, KC Millett, M Piatek, P Plunkett, A Stasiak Macromolecules 41 (12), 4444-4451, 2008 | 36 | 2008 |
Total curvature and total torsion of knotted polymers P Plunkett, M Piatek, A Dobay, JC Kern, KC Millett, A Stasiak, EJ Rawdon Macromolecules 40 (10), 3860-3867, 2007 | 33 | 2007 |
Knot localization in proteins EJ Rawdon, KC Millett, JI Sułkowska, A Stasiak Biochemical Society Transactions 41 (2), 538-541, 2013 | 28 | 2013 |
How topoisomerase IV can efficiently unknot and decatenate negatively supercoiled DNA molecules without causing their torsional relaxation EJ Rawdon, J Dorier, D Racko, KC Millett, A Stasiak Nucleic acids research 44 (10), 4528-4538, 2016 | 27 | 2016 |
Length of the tightest trefoil knot J Baranska, P Pieranski, S Przybyl, EJ Rawdon Physical Review E 70 (5), 051810, 2004 | 27 | 2004 |
Thickness of polygonal knots EJ Rawdon The University of Iowa, 1997 | 27 | 1997 |