| Critical Assessment of Metagenome Interpretation: the second round of challenges F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ... Nature methods 19 (4), 429-440, 2022 | 191 | 2022 |
| Genome Sequence of Lactococcus lactis subsp. lactis NCDO 2118, a GABA-Producing Strain MR OLIVEIRA, L. C. SARAIVA, T. D. L. SOARES, S. C. RAMOS, R. T. J. SA, P. H ... Genome Announcements 2 (5), e00980-14, 2014 | 34* | 2014 |
| GapBlaster-A Graphical Gap Filler for Prokaryote Genomes PHCG DE SÁ, F MIRANDA, A VERAS, DM DE MELO, S SOARES, ... Plos One 11, e0155327, 2016 | 29 | 2016 |
| Reverse vaccinology and subtractive genomics reveal new therapeutic targets against Mycoplasma pneumoniae: a causative agent of pneumonia TC Vilela Rodrigues, AK Jaiswal, A de Sarom, L de Castro Oliveira, ... Royal Society Open Science 6 (7), 190907, 2019 | 28 | 2019 |
| HiClass: a Python Library for Local Hierarchical Classification Compatible with Scikit-learn FM Miranda, N Köhnecke, BY Renard Journal of Machine Learning Research 24 (29), 1-17, 2023 | 15 | 2023 |
| Draft genome sequence of Trametes villosa (Sw.) Kreisel CCMB561, a tropical white-rot Basidiomycota from the semiarid region of Brazil DSS Ferreira, RB Kato, FM Miranda, K da Costa Pinheiro, PLC Fonseca, ... Data in Brief 18, 1581-1587, 2018 | 10 | 2018 |
| CovRadar: continuously tracking and filtering SARS-CoV-2 mutations for genomic surveillance A Wittig, F Miranda, M Hölzer, T Altenburg, JM Bartoszewicz, S Beyvers, ... Bioinformatics 38 (17), 4223-4225, 2022 | 7 | 2022 |
| Characterization of the first vaginal Lactobacillus crispatus genomes isolated in Brazil MO de Almeida, R Carvalho, FF Aburjaile, FM Miranda, JC Cerqueira, ... PeerJ 9, e11079, 2021 | 7 | 2021 |
| Comparative genomics of Bordetella pertussis and prediction of new vaccines and drug targets AG Felice, LNQ Santos, I Kolossowski, FL Zen, LG Alves, TCV Rodrigues, ... Journal of Biomolecular Structure and Dynamics 40 (20), 10136-10152, 2022 | 6 | 2022 |
| Draft Genome Sequences of Vibrio fluvialis Strains 560 and 539, Isolated from Environmental Samples AA DE OLIVEIRA VERAS, ML DA SILVA, JCM GOMES, LM DIAS, ... Genome Announcements 3, e01344-14, 2015 | 4 | 2015 |
| Pan-genomic analyses of 47 complete genomes of the Rickettsia genus and prediction of new vaccine targets and virulence factors of the species AG Felice, LG Alves, ASF Freitas, TCV Rodrigues, AK Jaiswal, S Tiwari, ... Journal of Biomolecular Structure and Dynamics 40 (16), 7496-7510, 2022 | 2 | 2022 |
| Improving Metagenomic Assemblies Through Data Partitioning: A GC Content Approach F Miranda, C Batista, A Silva, J Morais, N Neto, R Ramos Lecture Notes in Computer Science 10813, 415-425, 2018 | 1 | 2018 |
| Redundancy Treatment of NGS Contigs in Microbial Genome Finishing with Hashing-Based Approach M Braga, K Pinheiro, F Araújo, F Miranda, A Silva, R Ramos Advances in Bioinformatics and Computational Biology: 13th Brazilian …, 2020 | | 2020 |
| HiTaC: Hierarchical Taxonomic Classification of Fungal ITS Sequences FM Miranda, VAC Azevedo, BY Renard, VC Piro, RTJ Ramos bioRxiv, 2020.04. 24.014852, 2020 | | 2020 |
| Desenvolvimento do programa de computador gapblaster: uma ferramenta gráfica para fechamento de gaps em genomas procariotos FM MIRANDA | | 2017 |
| Aprimorando montagens metagenômicas através do particionamento de dados de sequenciamento pelo conteúdo GC FM MIRANDA | | |
Rommel RamosUniversidade Federal do ParáVerified email at ufpa.br
