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Jiarong Guo
Jiarong Guo
Center of Microbiome Science, Ohio State University
E-mail confirmado em osu.edu
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Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
144792019
VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
J Guo, B Bolduc, AA Zayed, A Varsani, G Dominguez-Huerta, TO Delmont, ...
Microbiome 9, 1-13, 2021
553*2021
The khmer software package: enabling efficient nucleotide sequence analysis
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
F1000Research 4, 2015
3672015
Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome
AA Zayed, JM Wainaina, G Dominguez-Huerta, E Pelletier, J Guo, ...
Science 376 (6589), 156-162, 2022
1442022
Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
BB Li, SS Roley, DS Duncan, J Guo, JF Quensen, HQ Yu, JM Tiedje
Soil Biology and Biochemistry 160, 108349, 2021
1022021
Microbial community analysis with ribosomal gene fragments from shotgun metagenomes
J Guo, JR Cole, Q Zhang, CT Brown, JM Tiedje
Applied and Environmental Microbiology 82 (1), 157-166, 2016
792016
Metagenomic analysis reveals the shared and distinct features of the soil resistome across tundra, temperate prairie, and tropical ecosystems
X Qian, S Gunturu, J Guo, B Chai, JR Cole, J Gu, JM Tiedje
Microbiome 9 (1), 108, 2021
752021
New biological insights into how deforestation in Amazonia affects soil microbial communities using metagenomics and metagenome-assembled genomes
ME Kroeger, TO Delmont, AM Eren, KM Meyer, J Guo, K Khan, ...
Frontiers in microbiology 9, 385589, 2018
682018
Root-associated microbiome of maize genotypes with contrasting phosphorus use efficiency. Phytobiomes J 2: 129–137
EA Gomes, UGP Lana, JF Quensen, SM de Sousa, CA Oliveira, J Guo, ...
Doi 10.1094/PBIOMES-03-18-0012-R, 2018
67*2018
Soil depth and crop determinants of bacterial communities under ten biofuel cropping systems
B Zhang, CR Penton, C Xue, JF Quensen, SS Roley, J Guo, A Garoutte, ...
Soil Biology and Biochemistry 112, 140-152, 2017
652017
Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation
AA Pratama, B Bolduc, AA Zayed, ZP Zhong, J Guo, DR Vik, MC Gazitúa, ...
PeerJ 9, e11447, 2021
612021
Diversity and ecological footprint of Global Ocean RNA viruses
G Dominguez-Huerta, AA Zayed, JM Wainaina, J Guo, F Tian, ...
Science 376 (6598), 1202-1208, 2022
442022
iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology
B Bolduc, O Zablocki, J Guo, AA Zayed, D Vik, P Dehal, ...
ISME communications 1 (1), 77, 2021
162021
Viral sequence identification SOP with VirSorter2 v3
J Guo, D Vik, A Adjie Pratama, S Roux, M Sullivan
protocolsio, 3, 2021
152021
Review, evaluation, and directions for gene-targeted assembly for ecological analyses of metagenomes
J Guo, JF Quensen, Y Sun, Q Wang, CT Brown, JR Cole, JM Tiedje
Frontiers in Genetics 10, 466249, 2019
92019
Rhizosphere metagenomics of three biofuel crops
J Guo
Michigan State University, 2016
82016
The International Virus Bioinformatics Meeting 2022
F Hufsky, D Beslic, D Boeckaerts, S Duchene, E González-Tortuero, ...
Viruses 14 (5), 973, 2022
52022
Comparing faster evolving rplB and rpsC versus SSU rRNA for improved microbial community resolution
J Guo, JR Cole, CT Brown, JM Tiedje
bioRxiv, 435099, 2018
12018
VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA
J Guo, B Bolduc, AA Zayed
Microbiome, 9 (1), 2021
2021
Getting started with VirSorter2 V. 2
J Guo
2020
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