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Hao (Harry) Feng
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Year
A Bayesian hierarchical model to detect differentially methylated loci from single nucleotide resolution sequencing data
H Feng, KN Conneely, H Wu
Nucleic acids research 42 (8), e69-e69, 2014
4422014
Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates
H Wu, T Xu, H Feng, L Chen, B Li, B Yao, Z Qin, P Jin, KN Conneely
Nucleic acids research 43 (21), e141-e141, 2015
3102015
Molecular signatures associated with ZIKV exposure in human cortical neural progenitors
F Zhang, C Hammack, SC Ogden, Y Cheng, EM Lee, Z Wen, X Qian, ...
Nucleic acids research 44 (18), 8610-8620, 2016
1802016
ADCYAP1R1 genotype associates with post‐traumatic stress symptoms in highly traumatized African‐American females
LM Almli, KB Mercer, K Kerley, H Feng, B Bradley, KN Conneely, ...
American Journal of Medical Genetics Part B: Neuropsychiatric Genetics 162 …, 2013
1112013
A human forebrain organoid model of fragile X syndrome exhibits altered neurogenesis and highlights new treatment strategies
Y Kang, Y Zhou, Y Li, Y Han, J Xu, W Niu, Z Li, S Liu, H Feng, W Huang, ...
Nature Neuroscience 24 (10), 1377-1391, 2021
882021
InfiniumPurify: An R package for estimating and accounting for tumor purity in cancer methylation research
Y Qin, H Feng, M Chen, H Wu, X Zheng
Genes & Diseases 5 (1), 43-45, 2018
582018
Supplementary Online Content
LM Almli, R Duncan, H Feng
56*2014
Induced organoids derived from patients with ulcerative colitis recapitulate colitic reactivity
SK Sarvestani, S Signs, B Hu, Y Yeu, H Feng, Y Ni, DR Hill, RC Fisher, ...
Nature communications 12 (1), 262, 2021
552021
Correcting systematic inflation in genetic association tests that consider interaction effects: Application to a genome-wide association study of posttraumatic stress disorder
LM Almli, R Duncan, H Feng, D Ghosh, EB Binder, B Bradley, KJ Ressler, ...
JAMA psychiatry 71 (12), 1392-1399, 2014
492014
Disease prediction by cell-free DNA methylation
H Feng, P Jin, H Wu
Briefings in bioinformatics 20 (2), 585-597, 2019
432019
Accounting for tumor purity improves cancer subtype classification from DNA methylation data
W Zhang, H Feng, H Wu, X Zheng
Bioinformatics 33 (17), 2651-2657, 2017
412017
Galactic cosmic radiation induces persistent epigenome alterations relevant to human lung cancer
EM Kennedy, DR Powell, Z Li, JSK Bell, BG Barwick, H Feng, ...
Scientific reports 8 (1), 6709, 2018
352018
Differential methylation analysis for bisulfite sequencing using DSS
H Feng, H Wu
Quantitative Biology 7 (4), 327-334, 2019
292019
Follow-up and extension of a prior genome-wide association study of posttraumatic stress disorder: gene× environment associations and structural magnetic resonance imaging in a …
LM Almli, A Srivastava, N Fani, K Kerley, KB Mercer, H Feng, B Bradley, ...
Biological psychiatry 76 (4), e3-e4, 2014
192014
A neural network-based method for exhaustive cell label assignment using single cell RNA-seq data
Z Li, H Feng
Scientific reports 12 (1), 910, 2022
102022
Problematic alcohol use associates with sodium channel and clathrin linker 1 (SCLT1) in trauma‐exposed populations
LM Almli, A Lori, JL Meyers, J Shin, N Fani, AX Maihofer, CM Nievergelt, ...
Addiction biology 23 (5), 1145-1159, 2018
102018
Damaged mitochondria coincide with presynaptic vesicle loss and abnormalities in alzheimer’s disease brain
W Wang, F Zhao, Y Lu, SL Siedlak, H Fujioka, H Feng, G Perry, X Zhu
Acta Neuropathologica Communications 11 (1), 54, 2023
62023
A comprehensive assessment of cell type-specific differential expression methods in bulk data
G Meng, W Tang, E Huang, Z Li, H Feng
Briefings in Bioinformatics 24 (1), bbac516, 2023
62023
Evaluation of epitranscriptome-wide N6-methyladenosine differential analysis methods
D Duan, W Tang, R Wang, Z Guo, H Feng
Briefings in Bioinformatics 24 (3), bbad139, 2023
42023
Peripheral sTREM2-Related Inflammatory Activity Alterations in Early-Stage Alzheimer’s Disease
GE Weber, M Khrestian, ED Tuason, Y Shao, J Pillai, S Rao, H Feng, ...
The Journal of Immunology 208 (10), 2283-2299, 2022
42022
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Articles 1–20