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Alexis Christoforides
Alexis Christoforides
Unknown affiliation
Verified email at tgen.org
Title
Cited by
Cited by
Year
A map of human genome variation from population scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
87482010
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
82412012
Whole-genome sequencing of multiple myeloma from diagnosis to plasma cell leukemia reveals genomic initiating events, evolution, and clonal tides
JB Egan, CX Shi, W Tembe, A Christoforides, A Kurdoglu, S Sinari, ...
Blood, The Journal of the American Society of Hematology 120 (5), 1060-1066, 2012
5042012
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
O Delaneau, J Marchini
Nature communications 5 (1), 3934, 2014
4342014
Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma
MJ Borad, MD Champion, JB Egan, WS Liang, R Fonseca, AH Bryce, ...
PLoS genetics 10 (2), e1004135, 2014
3562014
Genome and transcriptome sequencing in prospective metastatic triple-negative breast cancer uncovers therapeutic vulnerabilities
DW Craig, JA O'Shaughnessy, JA Kiefer, J Aldrich, S Sinari, TM Moses, ...
Molecular cancer therapeutics 12 (1), 104-116, 2013
2692013
Identification of somatic mutations in cancer through Bayesian-based analysis of sequenced genome pairs
A Christoforides, JD Carpten, GJ Weiss, MJ Demeure, DD Von Hoff, ...
BMC genomics 14, 1-12, 2013
962013
Genome-wide characterization of pancreatic adenocarcinoma patients using next generation sequencing
WS Liang, DW Craig, J Carpten, MJ Borad, MJ Demeure, GJ Weiss, T Izatt, ...
Public Library of Science 7 (10), e43192, 2012
902012
Next-generation sequencing of Coccidioides immitis isolated during cluster investigation
DM Engelthaler, T Chiller, JA Schupp, J Colvin, SM Beckstrom-Sternberg, ...
Emerging infectious diseases 17 (2), 227, 2011
562011
Paired tumor and normal whole genome sequencing of metastatic olfactory neuroblastoma
GJ Weiss, WS Liang, T Izatt, S Arora, I Cherni, RN Raju, G Hostetter, ...
PloS one 7 (5), e37029, 2012
512012
A pilot study using next-generation sequencing in advanced cancers: feasibility and challenges
GJ Weiss, WS Liang, MJ Demeure, JA Kiefer, G Hostetter, T Izatt, S Sinari, ...
PloS one 8 (10), e76438, 2013
402013
Whole genome sequencing reveals potential targets for therapy in patients with refractory KRASmutated metastatic colorectal cancer
V Shanmugam, RK Ramanathan, NA Lavender, S Sinari, M Chadha, ...
BMC medical genomics 7, 1-13, 2014
232014
Simultaneous characterization of somatic events and HPV-18 integration in a metastatic cervical carcinoma patient using DNA and RNA sequencing
WS Liang, J Aldrich, S Nasser, A Kurdoglu, L Phillips, R Reiman, ...
International Journal of Gynecologic Cancer 24 (2), 2014
222014
Clinical implementation of integrated genomic profiling in patients with advanced cancers
MJ Borad, JB Egan, RM Condjella, WS Liang, R Fonseca, NR Ritacca, ...
Scientific reports 6 (1), 25, 2016
212016
Cancer of the ampulla of Vater: analysis of the whole genome sequence exposes a potential therapeutic vulnerability
MJ Demeure, DW Craig, S Sinari, TM Moses, A Christoforides, J Dinh, ...
Genome medicine 4, 1-10, 2012
202012
An integrated framework for reporting clinically relevant biomarkers from paired tumor/normal genomic and transcriptomic sequencing data in support of clinical trials in …
S Nasser, AA Kurdolgu, T Izatt, J Aldrich, ML Russell, A Christoforides, ...
Pacific Symposium on Biocomputing Co-Chairs, 56-67, 2014
182014
S3-5: Next Generation Sequencing Reveals Co-Activating Events in the MAPK and P13K/AKT Pathways in Metastatic Triple Negative Breast Cancers.
J O'Shaughnessy, DW Craig, J Kiefer, S Sinari, TM Moses, S Wong, ...
Cancer Research 71 (24_Supplement), S3-5-S3-5, 2011
62011
Comprehensive genomic analysis of metastatic mucinous urethral adenocarcinoma guides precision oncology treatment: Targetable EGFR amplification leading to successful treatment …
AH Bryce, MJ Borad, JB Egan, RM Condjella, WS Liang, R Fonseca, ...
Clinical genitourinary cancer 15 (4), e727-e734, 2017
52017
Paired tumor and normal whole genome and transcriptome sequencing of transitional cell carcinoma of the upper urinary tract
I Cherni, DW Craig, L Phillips, WS Liang, AS Baker, T Izatt, A Kurdoglu, ...
Cancer Research 72 (8_Supplement), 3679-3679, 2012
22012
Whole-genome and transcriptome interrogation of metastatic chemo-resistant triple negative breast cancer from African American patients
DW Craig, JA O'Shaughnessy, J Kiefer, TM Moses, S Sinari, T Itzatt, ...
CANCER RESEARCH 71, 2011
12011
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