Ridge regression and other kernels for genomic selection with R package rrBLUP JB Endelman The Plant Genome 4 (3), 250-255, 2011 | 1879 | 2011 |
Genomic selection in wheat breeding using genotyping-by-sequencing J Poland, J Endelman, J Dawson, J Rutkoski, S Wu, Y Manes, ... The Plant Genome 5 (3), 103-113, 2012 | 798 | 2012 |
Shrinkage estimation of the realized relationship matrix JB Endelman, JL Jannink G3: Genes| Genomes| Genetics 2 (11), 1405-1413, 2012 | 444 | 2012 |
The USDA Barley Core Collection: Genetic Diversity, Population Structure, and Potential for Genome-Wide Association Studies M Muñoz-Amatriaín, A Cuesta-Marcos, JB Endelman, J Comadran, ... PLOS ONE 9 (4), e94688, 2014 | 254 | 2014 |
Software for genome-wide association studies in autopolyploids and its application to potato UR Rosyara, WS De Jong, DS Douches, JB Endelman Plant Genome 9, 2016 | 238 | 2016 |
Genomic Predictability of Interconnected Biparental Maize Populations C Riedelsheimer, JB Endelman, M Stange, ME Sorrells, JL Jannink, ... Genetics 194 (2), 493-503, 2013 | 237 | 2013 |
Structure-guided recombination creates an artificial family of cytochromes P450 CR Otey, M Landwehr, JB Endelman, K Hiraga, JD Bloom, FH Arnold PLoS biology 4 (5), e112, 2006 | 194 | 2006 |
Library analysis of SCHEMA‐guided protein recombination MM Meyer, JJ Silberg, CA Voigt, JB Endelman, SL Mayo, ZG Wang, ... Protein Science 12 (8), 1686-1693, 2003 | 177 | 2003 |
LPmerge: an R package for merging genetic maps by linear programming JB Endelman, C Plomion Bioinformatics 30 (11), 1623-1624, 2014 | 163 | 2014 |
Assessing Genomic Selection Prediction Accuracy in a Dynamic Barley Breeding Population AH Sallam, JB Endelman, JL Jannink, KP Smith The Plant Genome 8 (1), 2015 | 154 | 2015 |
Optimal design of preliminary yield trials with genome-wide markers JB Endelman, GN Atlin, Y Beyene, K Semagn, X Zhang, ME Sorrells, ... Crop Science 54, 48-59, 2014 | 142 | 2014 |
Genetic variance partitioning and genome-wide prediction with allele dosage information in autotetraploid potato JB Endelman, CAS Carley, PC Bethke, JJ Coombs, ME Clough, ... Genetics 209 (1), 77-87, 2018 | 125 | 2018 |
The use of unbalanced historical data for genomic selection in an international wheat breeding program JC Dawson, JB Endelman, N Heslot, J Crossa, J Poland, S Dreisigacker, ... Field Crops Research 154, 12-22, 2013 | 120 | 2013 |
Functional evolution and structural conservation in chimeric cytochromes P450: calibrating a structure-guided approach CR Otey, JJ Silberg, CA Voigt, JB Endelman, G Bandara, FH Arnold Chemistry & biology 11 (3), 309-318, 2004 | 117 | 2004 |
Phased, chromosome-scale genome assemblies of tetraploid potato reveal a complex genome, transcriptome, and predicted proteome landscape underpinning genetic diversity G Hoopes, X Meng, JP Hamilton, SR Achakkagari, FAF Guesdes, ... Molecular Plant 15 (3), 520-536, 2022 | 109 | 2022 |
Genetic mapping with an inbred line-derived F2 population in potato JB Endelman, SH Jansky Theoretical and Applied Genetics 129, 935-943, 2016 | 98 | 2016 |
FIELDImageR: An R package to analyze orthomosaic images from agricultural field trials FI Matias, MV Caraza‐Harter, JB Endelman The Plant Phenome Journal 3 (1), e20005, 2020 | 93 | 2020 |
Site-directed protein recombination as a shortest-path problem JB Endelman, JJ Silberg, ZG Wang, FH Arnold Protein Engineering Design and Selection 17 (7), 589-594, 2004 | 93 | 2004 |
Residual effects of compost on soil quality and dryland wheat yield sixteen years after compost application JR Reeve, JB Endelman, BE Miller, DJ Hole Soil Science Society of America Journal 76 (1), 278-285, 2012 | 84 | 2012 |
Automated tetraploid genotype calling by hierarchical clustering CAS Carley, JJ Coombs, DS Douches, PC Bethke, JP Palta, RG Novy, ... Theoretical and Applied Genetics 130 (4), 717-726, 2017 | 68 | 2017 |