A. Max Burroughs
A. Max Burroughs
National Center for Biotechnology Information
Verified email at nih.gov - Homepage
Title
Cited by
Cited by
Year
An atlas of active enhancers across human cell types and tissues
R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ...
Nature 507 (7493), 455-461, 2014
16332014
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ...
Nature 452 (7190), 991-996, 2008
9992008
A promoter-level mammalian expression atlas
ARR Forrest, H Kawaji, M Rehli, JK Baillie, MJL De Hoon, V Haberle, ...
Nature 507 (7493), 462-470, 2014
8982014
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199-204, 2017
5162017
Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes
AM Burroughs, KN Allen, D Dunaway-Mariano, L Aravind
Journal of molecular biology 361 (5), 1003-1034, 2006
3642006
A comprehensive survey of 3′ animal miRNA modification events and a possible role for 3′ adenylation in modulating miRNA targeting effectiveness
AM Burroughs, Y Ando, MJL de Hoon, Y Tomaru, T Nishibu, R Ukekawa, ...
Genome research 20 (10), 1398-1410, 2010
3262010
Deep-sequencing of human Argonaute-associated small RNAs provides insight into miRNA sorting and reveals Argonaute association with RNA fragments of diverse origin
AM Burroughs, Y Ando, ML de Hoon, Y Tomaru, H Suzuki, Y Hayashizaki, ...
RNA biology 8 (1), 158-177, 2011
2582011
Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila
FM Cernilogar, MC Onorati, GO Kothe, AM Burroughs, KM Parsi, ...
Nature 480 (7377), 391-395, 2011
203*2011
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature biotechnology 35 (9), 872-878, 2017
1982017
The prokaryotic antecedents of the ubiquitin-signaling system and the early evolution of ubiquitin-like β-grasp domains
LM Iyer, AM Burroughs, L Aravind
Genome biology 7 (7), R60, 2006
1542006
Small but versatile: the extraordinary functional and structural diversity of the β-grasp fold
AM Burroughs, S Balaji, LM Iyer, L Aravind
Biology direct 2 (1), 18, 2007
1462007
Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing
V Anantharaman, KS Makarova, AM Burroughs, EV Koonin, L Aravind
Biology direct 8 (1), 15, 2013
1422013
Anatomy of the E2 ligase fold: implications for enzymology and evolution of ubiquitin/Ub-like protein conjugation
AM Burroughs, M Jaffee, LM Iyer, L Aravind
Journal of structural biology 162 (2), 205-218, 2008
1132008
PAPD5-mediated 3′ adenylation and subsequent degradation of miR-21 is disrupted in proliferative disease
J Boele, H Persson, JW Shin, Y Ishizu, IS Newie, R Søkilde, SM Hawkins, ...
Proceedings of the National Academy of Sciences 111 (31), 11467-11472, 2014
1082014
Unraveling the biochemistry and provenance of pupylation: a prokaryotic analog of ubiquitination
L Iyer, AM Burroughs, L Aravind
Biology direct 3 (1), 45, 2008
962008
Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation
H Morikawa, N Ohkura, A Vandenbon, M Itoh, S Nagao-Sato, H Kawaji, ...
Proceedings of the National Academy of Sciences 111 (14), 5289-5294, 2014
952014
Natural history of the E1‐like superfamily: implication for adenylation, sulfur transfer, and ubiquitin conjugation
AM Burroughs, LM Iyer, L Aravind
Proteins: Structure, Function, and Bioinformatics 75 (4), 895-910, 2009
852009
Amidoligases with ATP-grasp, glutamine synthetase-like and acetyltransferase-like domains: synthesis of novel metabolites and peptide modifications of proteins
LM Iyer, S Abhiman, AM Burroughs, L Aravind
Molecular bioSystems 5 (12), 1636-1660, 2009
852009
Comparative genomics and evolutionary trajectories of viral ATP dependent DNA-packaging systems
A Burroughs, L Iyer, L Aravind
Genome dynamics 3 (R), 48, 2007
812007
Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling
AM Burroughs, D Zhang, DE Schäffer, LM Iyer, L Aravind
Nucleic acids research 43 (22), 10633-10654, 2015
772015
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Articles 1–20