Eric T. Dawson
Eric T. Dawson
Verified email at nvidia.com - Homepage
Title
Cited by
Cited by
Year
Variation graph toolkit improves read mapping by representing genetic variation in the reference
E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ...
Nature biotechnology 36 (9), 875-879, 2018
1542018
ReactomeFIViz: the Reactome FI Cytoscape app for pathway and network-based data analysis
Guanming Wu, Eric Dawson, Adrian Duong, Robin Haw, Lincoln Stein
F1000Research 3, 2014
1542014
Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design
A Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, ...
Journal of molecular evolution 79 (3-4), 130-142, 2014
432014
Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin
AG Meyer, ET Dawson, CO Wilke
Philosophical Transactions of the Royal Society B: Biological Sciences 368 …, 2013
322013
Genotyping structural variants in pangenome graphs using the vg toolkit
G Hickey, D Heller, J Monlong, JA Sibbesen, J Sirén, J Eizenga, ...
Genome biology 21 (1), 1-17, 2020
192020
Sequence variation aware genome references and read mapping with the variation graph toolkit
E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ...
BioRxiv, 234856, 2017
132017
Limited utility of residue masking for positive-selection inference
SJ Spielman, ET Dawson, CO Wilke
Molecular biology and evolution 31 (9), 2496-2500, 2014
112014
Sequence variation aware genome references and read mapping with the variation graph toolkit. bioRxiv
E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ...
December 234856, 1-27, 2017
92017
Reactomefiviz: a cytoscape app for pathway and network-based data analysis. F1000Res. 2014; 3: 146
G Wu, E Dawson, A Duong, R Haw, L Stein
3
Viral coinfection analysis using a MinHash toolkit
ET Dawson, S Wagner, D Roberson, M Yeager, J Boland, E Garrison, ...
BMC bioinformatics 20 (1), 389, 2019
22019
SVCurator: A Crowdsourcing app to visualize evidence of structural variants for the human genome
LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ...
BioRxiv, 581264, 2019
22019
rkmh: a MinHash toolbox for analyzing HPV coinfections
ET Dawson, S Wagner, D Roberson, M Yeager, J Boland, E Garrison, ...
Cancer Research 78 (13 Supplement), 3273-3273, 2018
12018
Methods developed during the first National Center for Biotechnology Information Structural Variation Codeathon at Baylor College of Medicine
M Mahmoud, AR Gener, MM Khayat, AC English, A Balaji, A Zhou, ...
F1000Research 9 (1141), 1141, 2020
2020
A crowdsourced set of curated structural variants for the human genome
LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ...
PLoS computational biology 16 (6), e1007933, 2020
2020
Variation-aware algorithms for cancer genome analysis
ET Dawson
University of Cambridge, 2020
2020
GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats
ET Dawson, R Durbin
Journal of open source software 4 (33), 2019
2019
Germline structural variant detection with variation graphs
ET Dawson, E Garrison, A Novak, B Paten, J Eizinga, G Hickey, ...
Cancer Research 77 (13 Supplement), 3570-3570, 2017
2017
Human microRNAs exhibit two distributions of expression within and across cancer samples
ET Dawson
2015
network-based data analysis [version 1; peer review: 1 approved
G Wu, E Dawson, A Duong, R Haw, L Stein
2014
network-based data analysis [version 2; referees: 2 approved]
G Wu, E Dawson, A Duong, R Haw, L Stein
2014
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