Christopher Henry
Christopher Henry
Computational Biologist, Argonne National Laboratory
Verified email at mcs.anl.gov
Title
Cited by
Cited by
Year
A genome‐scale metabolic reconstruction for Escherichia coli K‐12 MG1655 that accounts for 1260 ORFs and thermodynamic information
AM Feist, CS Henry, JL Reed, M Krummenacker, AR Joyce, PD Karp, ...
Molecular systems biology 3 (1), 121, 2007
15812007
High-throughput generation, optimization and analysis of genome-scale metabolic models
CS Henry, M DeJongh, AA Best, PM Frybarger, B Linsay, RL Stevens
Nature biotechnology 28 (9), 977-982, 2010
9262010
Improvements to PATRIC, the all-bacterial bioinformatics database and analysis resource center
AR Wattam, JJ Davis, R Assaf, S Boisvert, T Brettin, C Bun, N Conrad, ...
Nucleic acids research 45 (D1), D535-D542, 2017
9142017
Thermodynamics-based metabolic flux analysis
CS Henry, LJ Broadbelt, V Hatzimanikatis
Biophysical journal 92 (5), 1792-1805, 2007
6022007
Group contribution method for thermodynamic analysis of complex metabolic networks
MD Jankowski, CS Henry, LJ Broadbelt, V Hatzimanikatis
Biophysical journal 95 (3), 1487-1499, 2008
4292008
KBase: the United States department of energy systems biology knowledgebase
AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ...
Nature biotechnology 36 (7), 566-569, 2018
411*2018
Competitive and cooperative metabolic interactions in bacterial communities
S Freilich, R Zarecki, O Eilam, ES Segal, CS Henry, M Kupiec, U Gophna, ...
Nature communications 2 (1), 1-7, 2011
3712011
Exploring the diversity of complex metabolic networks
V Hatzimanikatis, C Li, JA Ionita, CS Henry, MD Jankowski, LJ Broadbelt
Bioinformatics 21 (8), 1603-1609, 2005
3562005
Genome-scale thermodynamic analysis of Escherichia coli metabolism
CS Henry, MD Jankowski, LJ Broadbelt, V Hatzimanikatis
Biophysical journal 90 (4), 1453-1461, 2006
2542006
iBsu1103: a new genome-scale metabolic model of Bacillus subtilis based on SEED annotations
CS Henry, JF Zinner, MP Cohoon, RL Stevens
Genome Biol 10 (6), R69, 2009
1722009
Discovery and analysis of novel metabolic pathways for the biosynthesis of industrial chemicals: 3‐hydroxypropanoate
CS Henry, LJ Broadbelt, V Hatzimanikatis
Biotechnology and bioengineering 106 (3), 462-473, 2010
1602010
SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models
RK Aziz, S Devoid, T Disz, RA Edwards, CS Henry, GJ Olsen, R Olson, ...
PloS one 7 (10), e48053, 2012
1552012
MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics
JG Jeffryes, RL Colastani, M Elbadawi-Sidhu, T Kind, TD Niehaus, ...
Journal of cheminformatics 7 (1), 1-8, 2015
1512015
Automated genome annotation and metabolic model reconstruction in the SEED and Model SEED
S Devoid, R Overbeek, M DeJongh, V Vonstein, AA Best, C Henry
Systems Metabolic Engineering, 17-45, 2013
1242013
Computational discovery of biochemical routes to specialty chemicals
C Li, CS Henry, MD Jankowski, JA Ionita, V Hatzimanikatis, LJ Broadbelt
Chemical engineering science 59 (22-23), 5051-5060, 2004
982004
MEMOTE for standardized genome-scale metabolic model testing
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
Nature biotechnology 38 (3), 272-276, 2020
922020
Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset
PE Larsen, FR Collart, D Field, F Meyer, KP Keegan, CS Henry, ...
Microbial informatics and experimentation 1 (1), 1-11, 2011
872011
Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model
K Tanaka, CS Henry, JF Zinner, E Jolivet, MP Cohoon, F Xia, V Bidnenko, ...
Nucleic acids research 41 (1), 687-699, 2013
852013
Metabolic reconstruction and modeling microbial electrosynthesis
CW Marshall, DE Ross, KM Handley, PB Weisenhorn, JN Edirisinghe, ...
Scientific reports 7 (1), 1-12, 2017
802017
Plant B vitamin pathways and their compartmentation: a guide for the perplexed
S Gerdes, C Lerma-Ortiz, O Frelin, SMD Seaver, CS Henry, ...
Journal of experimental botany 63 (15), 5379-5395, 2012
802012
The system can't perform the operation now. Try again later.
Articles 1–20