| The genome sequence of the plant pathogen Xylella fastidiosa AJG Simpson, FC Reinach, P Arruda, FA Abreu, M Acencio, R Alvarenga, ... Nature 406 (6792), 151-157, 2000 | 1109 | 2000 |
| Analysis and functional annotation of an expressed sequence tag collection for tropical crop sugarcane AL Vettore, FR da Silva, EL Kemper, GM Souza, AM da Silva, MIT Ferro, ... Genome research 13 (12), 2725-2735, 2003 | 384 | 2003 |
| Genome mapping and expression analyses of human intronic noncoding RNAs reveal tissue-specific patterns and enrichment in genes related to regulation of transcription HI Nakaya, PP Amaral, R Louro, A Lopes, AA Fachel, YB Moreira, ... Genome biology 8 (3), 1-25, 2007 | 265 | 2007 |
| Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics LP Antunes, LF Martins, RV Pereira, AM Thomas, D Barbosa, LN Lemos, ... Scientific reports 6 (1), 1-13, 2016 | 234 | 2016 |
| Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer EM Reis, HI Nakaya, R Louro, FC Canavez, ÁVF Flatschart, GT Almeida, ... Oncogene 23 (39), 6684-6692, 2004 | 201 | 2004 |
| Polyductin, the PKHD1 gene product, comprises isoforms expressed in plasma membrane, primary cilium, and cytoplasm LFC Menezes, Y Cai, Y Nagasawa, AMG Silva, ML Watkins, AM Da Silva, ... Kidney international 66 (4), 1345-1355, 2004 | 183 | 2004 |
| The contribution of 700,000 ORF sequence tags to the definition of the human transcriptome AA Camargo, HPB Samaia, E Dias-Neto, DF Simão, IA Migotto, ... Proceedings of the National Academy of Sciences 98 (21), 12103-12108, 2001 | 160 | 2001 |
| Xylella fastidiosa outer membrane vesicles modulate plant colonization by blocking attachment to surfaces M Ionescu, PA Zaini, C Baccari, S Tran, AM da Silva, SE Lindow Proceedings of the National Academy of Sciences 111 (37), E3910-E3918, 2014 | 157 | 2014 |
| Cyclic AMP and calcium interplay as second messengers in melatonin-dependent regulation of Plasmodium falciparum cell cycle FH Beraldo, FM Almeida, AM da Silva, CRS Garcia The Journal of cell biology 170 (4), 551-557, 2005 | 157 | 2005 |
| MARVEL, a tool for prediction of bacteriophage sequences in metagenomic bins D Amgarten, LPP Braga, AM Da Silva, JC Setubal Frontiers in genetics, 304, 2018 | 153 | 2018 |
| Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii LM Moreira, NF Almeida, N Potnis, LA Digiampietri, SS Adi, JC Bortolossi, ... BMC genomics 11 (1), 1-25, 2010 | 153 | 2010 |
| Starvation promotes Dictyostelium development by relieving PufA inhibition of PKA translation through the YakA kinase pathway GM Souza, AM Silva, A Kuspa Development 126 (14), 3263-3274, 1999 | 144 | 1999 |
| The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags H Brentani, OL Caballero, AA Camargo, AM da Silva, WA da Silva Jr, ... Proceedings of the National Academy of Sciences 100 (23), 13418-13423, 2003 | 142 | 2003 |
| Metagenomic analysis of a tropical composting operation at the São Paulo Zoo Park reveals diversity of biomass degradation functions and organisms LF Martins, LP Antunes, RC Pascon, JCF de Oliveira, LA Digiampietri, ... PloS one 8 (4), e61928, 2013 | 137 | 2013 |
| Neutral trehalases catalyse intracellular trehalose breakdown in the filamentous fungi Aspergillus nidulans and Neurospora crassa C d'Enfert, BM Bonini, PDA Zapella, T Fontaine, AM Da Silva, HF Terenzi Molecular microbiology 32 (3), 471-483, 1999 | 129 | 1999 |
| Transcription profiling of signal transduction-related genes in sugarcane tissues FS Papini-Terzi, FR Rocha, RZ Nicoliello Vêncio, KC Oliveira, ... DNA research 12 (1), 27-38, 2005 | 117 | 2005 |
| DNA microarray-based genome comparison of a pathogenic and a nonpathogenic strain of Xylella fastidiosa delineates genes important for bacterial virulence T Koide, PA Zaini, LM Moreira, RZN Vêncio, AY Matsukuma, AM Durham, ... Journal of bacteriology 186 (16), 5442-5449, 2004 | 101 | 2004 |
| Androgen responsive intronic non-coding RNAs R Louro, HI Nakaya, PP Amaral, F Festa, MC Sogayar, AM da Silva, ... BMC biology 5, 1-14, 2007 | 99 | 2007 |
| Large-scale transcriptome analyses reveal new genetic marker candidates of head, neck, and thyroid cancer EM Reis, EPB Ojopi, FL Alberto, P Rahal, F Tsukumo, UM Mancini, ... Cancer research 65 (5), 1693-1699, 2005 | 90 | 2005 |
| The iron stimulon of Xylella fastidiosa includes genes for type IV pilus and colicin V-like bacteriocins PA Zaini, AC Fogaça, FGN Lupo, HI Nakaya, RZN Vêncio, AM da Silva Journal of bacteriology 190 (7), 2368-2378, 2008 | 66 | 2008 |
João Carlos SetubalProfessor of Bioinformatics, University of Sao PauloVerified email at iq.usp.br
