Saad I. Sheikh
Saad I. Sheikh
Unknown affiliation
Verified email at cise.ufl.edu
Title
Cited by
Cited by
Year
Reconstructing sibling relationships in wild populations
TY Berger-Wolf, SI Sheikh, B DasGupta, MV Ashley, IC Caballero, ...
Bioinformatics 23 (13), i49-i56, 2007
852007
KINALYZER, a computer program for reconstructing sibling groups
MV Ashley, IC Caballero, W Chaovalitwongse, B Dasgupta, P Govindan, ...
Molecular Ecology Resources 9 (4), 1127-1131, 2009
582009
Paternity analysis in a litter of whale shark embryos
JV Schmidt, CC Chen, SI Sheikh, MG Meekan, BM Norman, SJ Joung
Endangered Species Research 12 (2), 117-124, 2010
422010
Using the fast fourier transform to accelerate the computational search for RNA conformational switches
E Senter, S Sheikh, I Dotu, Y Ponty, P Clote
PloS one 7 (12), e50506, 2012
242012
Impact of the energy model on the complexity of RNA folding with pseudoknots
S Sheikh, R Backofen, Y Ponty
Annual Symposium on Combinatorial Pattern Matching, 321-333, 2012
212012
Combinatorial reconstruction of half-sibling groups from microsatellite data
SI Sheikh, TY Berger-Wolf, AA Khokhar, IC Caballero, MV Ashley, ...
Journal of bioinformatics and computational biology 8 (02), 337-356, 2010
182010
Full sibling reconstruction in wild populations from microsatellite genetic markers
MV Ashley, TY Berger-Wolf, IC Caballero, W Chaovalitwongse, ...
Computational Biology: New Research. Nova Science Publishers, Hauppauge, 231-258, 2008
172008
Error tolerant sibship reconstruction in wild populations
SI Sheikh, TY Berger-Wolf, MV Ashley, IC Caballero, W Chaovalitwongse, ...
Computational Systems Bioinformatics: (Volume 7), 273-284, 2008
172008
A graph-theoretic approach for classification and structure prediction of transmembrane β-barrel proteins
P Chassignet, S Sheikh, JM Steyaert
Bmc Genomics 13 (2), 1-18, 2012
142012
New optimization model and algorithm for sibling reconstruction from genetic markers
WA Chaovalitwongse, CA Chou, TY Berger-Wolf, B DasGupta, S Sheikh, ...
INFORMS Journal on Computing 22 (2), 180-194, 2010
142010
Consensus methods for reconstruction of sibling relationships from genetic data
SI Sheikh, TY Berger-Wolf, AA Khokhar, B DasGupta
4th Multidisciplinary Workshop on Advances in Preference Handling, Chicago, IL, 2008
72008
Stability analysis of phylogenetic trees
SI Sheikh, T Kahveci, S Ranka, J Gordon Burleigh
Bioinformatics 29 (2), 166-174, 2013
62013
Reconstructing sibling relationships from microsatellite data
SI Sheikh, TY Berger-Wolf, W Chaovalitwongse, MV Ashley
Proceedings of the European Conf. on Computational Biology (ECCB), 2007
52007
Column-generation framework of nonlinear similarity model for reconstructing sibling groups
CA Chou, Z Liang, WA Chaovalitwongse, TY Berger-Wolf, B DasGupta, ...
INFORMS Journal on Computing 27 (1), 35-47, 2015
42015
On approximating an implicit cover problem in biology
MV Ashley, TY Berger-Wolf, W Chaovalitwongse, B DasGupta, A Khokhar, ...
International Conference on Algorithmic Applications in Management, 43-54, 2009
42009
Efficient and scalable parallel reconstruction of sibling relationships from genetic data in wild populations
S Sheikh, A Khokhar, T Berger-Wolf
2010 IEEE International Symposium on Parallel & Distributed Processing …, 2010
22010
Combinatorial methods in kinship analysis.
SI Sheikh
University of Illinois at Chicago, 2009
22009
An integrated optimization framework for inferring two generation kinships and parental genotypes from microsatellite samples
D Won, CA Chou, WA Chaovalitwongse, TY Berger-Wolf, B Dasgupta, ...
Proceedings of the ACM Conference on Bioinformatics, Computational Biology …, 2012
12012
An implicit cover problem in wild population study
MV Ashley, TY Berger-Wolf, W Chaovalitwongse, B DasGupta, A Khokhar, ...
Discrete Mathematics, Algorithms and Applications 2 (01), 21-31, 2010
12010
Combinatorial reconstruction of half-sibling groups
SI Sheikh, TY Berger-Wolf, AA Khokhar, IC Caballero, MV Ashley, ...
Proc. 8th Intl Conf Computational Systems Biology, 2009
12009
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Articles 1–20