Phil Ewels
Phil Ewels
Bioinformatician, NGI Applications, Science for Life Laboratory, Stockholm
Verified email at - Homepage
Cited by
Cited by
MultiQC: summarize analysis results for multiple tools and samples in a single report
P Ewels, M Magnusson, S Lundin, M Käller
Bioinformatics 32 (19), 3047-3048, 2016
Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C
B Mifsud, F Tavares-Cadete, AN Young, R Sugar, S Schoenfelder, ...
Nature genetics 47 (6), 598, 2015
Genetic determinants of ulcerative colitis include the ECM1 locus and five loci implicated in Crohn's disease
SA Fisher, M Tremelling, CA Anderson, R Gwilliam, S Bumpstead, ...
Nature genetics 40 (6), 710-712, 2008
HiCUP: pipeline for mapping and processing Hi-C data
S Wingett, P Ewels, M Furlan-Magaril, T Nagano, S Schoenfelder, ...
F1000Research 4, 2015
Global reorganization of the nuclear landscape in senescent cells
T Chandra, PA Ewels, S Schoenfelder, M Furlan-Magaril, SW Wingett, ...
Cell reports 10 (4), 471-483, 2015
Large scale association analysis of novel genetic loci for coronary artery disease
Coronary Artery Disease Consortium
Arteriosclerosis, thrombosis, and vascular biology 29 (5), 774-780, 2009
Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
S Patalano, A Vlasova, C Wyatt, P Ewels, F Camara, PG Ferreira, ...
Proceedings of the National Academy of Sciences 112 (45), 13970-13975, 2015
Sorting nexin-1 defines an early phase of Salmonella-containing vacuole-remodeling during Salmonella infection
MV Bujny, PA Ewels, S Humphrey, N Attar, MA Jepson, PJ Cullen
Journal of cell science 121 (12), 2027-2036, 2008
High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia
S Baker, K Holt, E Van de Vosse, P Roumagnac, S Whitehead, E King, ...
Journal of clinical microbiology 46 (5), 1741-1746, 2008
Understanding functional miRNA–target interactions in vivo by site-specific genome engineering
AR Bassett, G Azzam, L Wheatley, C Tibbit, T Rajakumar, S McGowan, ...
Nature communications 5 (1), 1-11, 2014
A Complete Overhaul of the Electron Energy-Loss Spectroscopy and X-Ray Absorption Spectroscopy Database:
P Ewels, T Sikora, V Serin, CP Ewels, L Lajaunie
Microscopy and Microanalysis, 1-8, 2016
The nf-core framework for community-curated bioinformatics pipelines
PA Ewels, A Peltzer, S Fillinger, H Patel, J Alneberg, A Wilm, MU Garcia, ...
Nature Biotechnology 38 (3), 276-278, 2020
nf-core: Community curated bioinformatics pipelines
PA Ewels, A Peltzer, S Fillinger, J Alneberg, H Patel, A Wilm, MU Garcia, ...
bioRxiv, 610741, 2019
Transcriptomics and methylomics of CD4-positive T cells in arsenic-exposed women
K Engström, TK Wojdacz, F Marabita, P Ewels, M Käller, F Vezzi, ...
Archives of toxicology 91 (5), 2067-2078, 2017
Cluster Flow: A user-friendly bioinformatics workflow tool
P Ewels, F Krueger, M Käller, S Andrews
F1000Research 5, 2016
Single base resolution analysis of 5-hydroxymethylcytosine in 188 human genes: implications for hepatic gene expression
M Ivanov, M Kals, V Lauschke, I Barragan, P Ewels, M Käller, T Axelsson, ...
Nucleic acids research 44 (14), 6756-6769, 2016
Building an international consortium for tracking coronavirus health status
E Segal, F Zhang, X Lin, G King, O Shalem, S Shilo, WE Allen, ...
Nature Medicine, 1-4, 2020
FastQC: High Throughput sequence QC report v. 0.10. 1
S Andrews, P Lindenbaum, B Howard, P Ewels
Cambridge, UK: Babraham Bioinformatics, 2011
Meet the neighbours: tools to dissect nuclear structure and function
CS Osborne, PA Ewels, ANC Young
Briefings in functional genomics 10 (1), 11-17, 2011
Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants
M Garcia, S Juhos, M Larsson, PI Olason, M Martin, J Eisfeldt, ...
F1000Research 9, 2020
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