| Single-molecule techniques in biophysics: a review of the progress in methods and applications H Miller, Z Zhou, J Shepherd, AJM Wollman, MC Leake Reports on Progress in Physics 81 (2), 024601, 2017 | 202 | 2017 |
| SerraNA: a program to determine nucleic acids elasticity from simulation data V Velasco-Berrelleza, M Burman, JW Shepherd, MC Leake, ... Phys. Chem. Chem. Phys 22, 19254-19266, 2020 | 24 | 2020 |
| The emergence of sequence-dependent structural motifs in stretched, torsionally constrained DNA JW Shepherd, RJ Greenall, MIJ Probert, A Noy, MC Leake Nucleic acids research 48 (4), 1748-1763, 2020 | 22 | 2020 |
| PySTACHIO: Python Single-molecule TrAcking stoiCHiometry Intensity and simulatiOn, a flexible, extensible, beginner-friendly and optimized program for analysis of single … JW Shepherd, EJ Higgins, AJM Wollman, MC Leake Computational and Structural Biotechnology Journal 19, 4049-4058, 2021 | 12 | 2021 |
| RecA and RecB: probing complexes of DNA repair proteins with mitomycin C in live Escherichia coli with single-molecule sensitivity AL Payne-Dwyer, AH Syeda, JW Shepherd, L Frame, MC Leake Journal of the Royal Society Interface 19 (193), 20220437, 2022 | 9 | 2022 |
| Molecular crowding in single eukaryotic cells: Using cell environment biosensing and single-molecule optical microscopy to probe dependence on extracellular ionic strength … JW Shepherd, S Lecinski, J Wragg, S Shashkova, C MacDonald, ... Methods 193, 54-61, 2021 | 9 | 2021 |
| Combining single-molecule super-resolved localization microscopy with fluorescence polarization imaging to study cellular processes JW Shepherd, AL Payne-Dwyer, JE Lee, A Syeda, MC Leake Journal of Physics: Photonics 3 (3), 034010, 2021 | 9 | 2021 |
| Investigating molecular crowding during cell division and hyperosmotic stress in budding yeast with FRET S Lecinski, JW Shepherd, L Frame, I Hayton, C MacDonald, MC Leake Current topics in membranes 88, 75-118, 2021 | 7 | 2021 |
| The impact of COVID-19 on UK university students: Understanding the interconnection of issues experienced during lockdown P McGivern, J Shepherd Power and Education 14 (3), 218-227, 2022 | 6 | 2022 |
| The Effect of Lithium on the Budding Yeast Saccharomyces cerevisiae upon Stress Adaptation P Reith, S Braam, N Welkenhuysen, S Lecinski, J Shepherd, ... Microorganisms 10 (3), 590, 2022 | 5 | 2022 |
| Elucidating the role of topological constraint on the structure of overstretched DNA using fluorescence polarization microscopy AS Backer, GA King, AS Biebricher, JW Shepherd, A Noy, MC Leake, ... The Journal of Physical Chemistry B 125 (30), 8351-8361, 2021 | 5 | 2021 |
| Correlating viscosity and molecular crowding with fluorescent nanobeads and molecular probes: in vitro and in vivo S Lecinski, JW Shepherd, K Bunting, L Dresser, SD Quinn, C MacDonald, ... Interface Focus 12 (6), 20220042, 2022 | 4 | 2022 |
| Crowding-induced morphological changes in synthetic lipid vesicles determined using smFRET SD Quinn, L Dresser, S Graham, D Conteduca, J Shepherd, MC Leake Frontiers in Bioengineering and Biotechnology 10, 958026, 2022 | 3 | 2022 |
| Localization microscopy: a review of the progress in methods and applications JW Shepherd, MC Leake Principles of Light Microscopy: From Basic to Advanced, 299-324, 2022 | 2 | 2022 |
| The End Restraint Method for Mechanically Perturbing Nucleic Acids In Silico JW Shepherd, MC Leake Chromosome Architecture: Methods and Protocols, 249-262, 2022 | 1 | 2022 |
| Correlating fluorescence microscopy, optical and magnetic tweezers to study single chiral biopolymers such as DNA JW Shepherd, S Guilbaud, Z Zhou, JAL Howard, M Burman, C Schaefer, ... Nature Communications 15 (1), 2748, 2024 | | 2024 |
| Exploring the structural dynamics of DNA using fluorescence polarization microscopy and optical tweezers AS Backer, GA King, AS Biebricher, J Shepherd, A Noy, MC Leake, ... Biophysical Journal 121 (3), 277a-278a, 2022 | | 2022 |
| Manipulating DNA with Magneto-Optical Tweezers and Multiscale Simulation JW Shepherd University of York, 2018 | | 2018 |
| Transverse fluorescence microscopy with magnetic and optical tweezers J Shepherd, Z Zhou, R Greenall, M Probert, M Leake Biophysical Journal 112 (3), 299a, 2017 | | 2017 |
| Classical and quantum simulations of DNA/spermine systems JW Shepherd University of York, 2015 | | 2015 |
