Ronald Taylor

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Christian StoeckertReseach Professor of Genetics, University of PennsylvaniaVerified email at upenn.edu
John QuackenbushHarvard T.H. Chan School of Public Health, Channing Division of Network Medicine, and Dana-FarberVerified email at hsph.harvard.edu
Helen ParkinsonEuropean Bioinformatics Institute - Head of Knowledge Management Section, Senior ScientistVerified email at ebi.ac.uk
Alvis BrazmaSenior Scientist, European Bioinformatics Institute, EMBLVerified email at ebi.ac.uk
Helen CaustonColumbia UniversityVerified email at cumc.columbia.edu
Gavin SherlockProfessor of Genetics, Stanford UniversityVerified email at stanford.edu
Paul SpellmanUniversity of California Los AngelesVerified email at mednet.ucla.edu
Pascal HingampAssociate Professor, Aix Marseille University, FranceVerified email at univ-amu.fr
Ugis SarkansTechnical team leader, EMBL-EBIVerified email at ebi.ac.uk
Jason McDermottScientist Pacific Northwest National LaboratoryVerified email at pnl.gov
Philippe Rocca-SerraUniversity of OxfordVerified email at oerc.ox.ac.uk
Jaak ViloProf. of Bioinformatics, Institute of Computer Science, University of Tartu, EstoniaVerified email at ut.ee
Martin VingronMax-Planck-Institut für molekulare GenetikVerified email at molgen.mpg.de
Susanna-Assunta SansoneUniversity of Oxford, Academic Lead for Research Practice; Professor of Data ReadinessVerified email at oerc.ox.ac.uk
Galya OrrScientist, Pacific Northwest National LaboratoryVerified email at pnnl.gov
H Steven WileyLaboratory Fellow, Pacific Northwest National LaboratoryVerified email at pnnl.gov
Christopher HenryComputational Biologist, Argonne National LaboratoryVerified email at mcs.anl.gov
Joseph A. WhiteDana-Farber Cancer InstituteVerified email at jimmy.harvard.edu
Hyun-Seob SongUniversity of Nebraska-Lincoln (UNL)Verified email at unl.edu
Hans C. BernsteinProfessor, UiT - The Arctic University of NorwayVerified email at uit.no

Ronald Taylor

Supervisory Biologist (Bioinformatics) at the National Cancer Institute

Verified email at nih.gov - Homepage

bioinformatics computational biology systems biology biological network inference HPC & Big Data analytics


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Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001	4949	2001
An overview of the Hadoop/MapReduce/HBase framework and its current applications in bioinformatics RC Taylor BMC bioinformatics 11, 1-6, 2010	716	2010
Genomic expansion of domain archaea highlights roles for organisms from new phyla in anaerobic carbon cycling CJ Castelle, KC Wrighton, BC Thomas, LA Hug, CT Brown, MJ Wilkins, ... Current biology 25 (6), 690-701, 2015	585	2015
Standards for microarray data CA Ball, G Sherlock, H Parkinson, P Rocca-Sera, C Brooksbank, ... Science 298 (5593), 539-539, 2002	217	2002
The Toxoplasma gondii Cyst Wall Protein CST1 Is Critical for Cyst Wall Integrity and Promotes Bradyzoite Persistence T Tomita, DJ Bzik, YF Ma, BA Fox, LM Markillie, RC Taylor, K Kim, ... PLoS pathogens 9 (12), e1003823, 2013	176	2013
Submission of microarray data to public repositories CA Ball, A Brazma, H Causton, S Chervitz, R Edgar, P Hingamp, ... PLoS Biology 2 (9), e317, 2004	157	2004
Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1 KM DeAngelis, D Sharma, R Varney, B Simmons, NG Isern, LM Markilllie, ... Frontiers in Microbiology 4, 280, 2013	139	2013
Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE) EW Deutsch, CA Ball, JJ Berman, GS Bova, A Brazma, RE Bumgarner, ... Nature biotechnology 26 (3), 305-312, 2008	132	2008
Microbial community metabolic modeling: a community data‐driven network reconstruction CS Henry, HC Bernstein, P Weisenhorn, RC Taylor, JY Lee, J Zucker, ... Journal of cellular physiology 231 (11), 2339-2345, 2016	118	2016
GEST: a gene expression search tool based on a novel Bayesian similarity metric L Hunter, RC Taylor, SM Leach, R Simon Bioinformatics 17 (suppl_1), S115-S122, 2001	106	2001
The frameshift signal of HIV-1 involves a potential intramolecular triplex RNA structure JD Dinman, S Richter, EP Plant, RC Taylor, AB Hammell, TM Rana Proceedings of the National Academy of Sciences 99 (8), 5331-5336, 2002	105	2002
Data standards for Omics data: the basis of data sharing and reuse SA Chervitz, EW Deutsch, D Field, H Parkinson, J Quackenbush, ... Bioinformatics for Omics Data: Methods and Protocols, 31-69, 2011	102	2011
Network inference algorithms elucidate Nrf2 regulation of mouse lung oxidative stress RC Taylor, G Acquaah-Mensah, M Singhal, D Malhotra, S Biswal PLoS computational biology 4 (8), e1000166, 2008	96	2008
Reverse engineering adverse outcome pathways EJ Perkins, JK Chipman, S Edwards, T Habib, F Falciani, R Taylor, ... Environmental toxicology and chemistry 30 (1), 22-38, 2011	90	2011
Identification of putative programmed− 1 ribosomal frameshift signals in large DNA databases AB Hammell, RC Taylor, SW Peltz, JD Dinman Genome research 9 (5), 417-427, 1999	85	1999
The highly conserved MraZ protein is a transcriptional regulator in Escherichia coli JM Eraso, LM Markillie, HD Mitchell, RC Taylor, G Orr, W Margolin Journal of bacteriology 196 (11), 2053-2066, 2014	82	2014
Bottlenecks and Hubs in Inferred Networks Are Important for Virulence in Salmonella typhimurium JE McDermott, RC Taylor, H Yoon, F Heffron Journal of Computational Biology 16 (2), 169-180, 2009	69	2009
DNA correlations. PJ Munson, RC Taylor, GS Michaels Nature 360 (6405), 636-636, 1992	67	1992
Changes in translational efficiency is a dominant regulatory mechanism in the environmental response of bacteria RC Taylor, BJM Webb Robertson, LM Markillie, MH Serres, BE Linggi, ... Integrative Biology 5 (11), 1393-1406, 2013	61	2013
Coregulation of terpenoid pathway genes and prediction of isoprene production in Bacillus subtilis using transcriptomics BM Hess, J Xue, LM Markillie, RC Taylor, HS Wiley, BK Ahring, B Linggi PLoS One 8 (6), e66104, 2013	40	2013

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