Toby Wilkinson
Toby Wilkinson
Bioinformatician, The Roslin Institute
Verified email at
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Cited by
CowPI: a rumen microbiome focussed version of the PICRUSt functional inference software
TJ Wilkinson, SA Huws, JE Edwards, AH Kingston-Smith, K Siu-Ting, ...
Frontiers in microbiology 9, 1095, 2018
Pros and cons of ion-torrent next generation sequencing versus terminal restriction fragment length polymorphism T-RFLP for studying the rumen bacterial community
G de la Fuente, A Belanche, SE Girwood, E Pinloche, T Wilkinson, ...
PloS one 9 (7), e101435, 2014
Characterization of the microbiome along the gastrointestinal tract of growing turkeys
TJ Wilkinson, AA Cowan, HE Vallin, LA Onime, LB Oyama, SJ Cameron, ...
Frontiers in microbiology 8, 1089, 2017
Cucumispora dikerogammari n. gen.(Fungi: Microsporidia) infecting the invasive amphipod Dikerogammarus villosus: a potential emerging disease in European rivers
MO Ovcharenko, K Bacela, T Wilkinson, JE Ironside, T Rigaud, RA Wattier
Parasitology 137 (2), 191-204, 2010
Comparison of the microbial population in rabbits and guinea pigs by next generation sequencing
EJ Crowley, JM King, T Wilkinson, HJ Worgan, KM Huson, MT Rose, ...
PloS one 12 (2), e0165779, 2017
Genetic diversity of the feminising microsporidian parasite Dictyocoela: New insights into host-specificity, sex and phylogeography
TJ Wilkinson, J Rock, NM Whiteley, MO Ovcharenko, JE Ironside
International Journal for Parasitology 41 (9), 959-966, 2011
The importance of extracellular vesicle purification for downstream analysis: A comparison of differential centrifugation and size exclusion chromatography for helminth pathogens
CN Davis, H Phillips, JJ Tomes, MT Swain, TJ Wilkinson, PM Brophy, ...
PLoS neglected tropical diseases 13 (2), e0007191, 2019
Temporal metagenomic and metabolomic characterization of fresh perennial ryegrass degradation by rumen bacteria
OL Mayorga, AH Kingston-Smith, EJ Kim, GG Allison, TJ Wilkinson, ...
Frontiers in microbiology 7, 1854, 2016
Fecal microbiota transplantation in gestating sows and neonatal offspring alters lifetime intestinal microbiota and growth in offspring
UM McCormack, T Curião, T Wilkinson, BU Metzler-Zebeli, H Reyer, ...
MSystems 3 (3), e00134-17, 2018
The rumen microbiome: an underexplored resource for novel antimicrobial discovery
LB Oyama, SE Girdwood, AR Cookson, N Fernandez-Fuentes, F Privé, ...
npj Biofilms and Microbiomes 3 (1), 1-9, 2017
Proteomics and in Silico Approaches To Extend Understanding of the Glutathione Transferase Superfamily of the Tropical Liver Fluke Fasciola gigantica
RM Morphew, N Eccleston, TJ Wilkinson, J McGarry, S Perally, M Prescott, ...
Journal of Proteome research 11 (12), 5876-5889, 2012
Improvement of feed efficiency in pigs through microbial modulation via fecal microbiota transplantation in sows and dietary supplementation of inulin in offspring
UM McCormack, T Curião, BU Metzler-Zebeli, T Wilkinson, H Reyer, ...
Applied and environmental microbiology 85 (22), e01255-19, 2019
The anti-fecundity effect of 5-azacytidine (5-AzaC) on Schistosoma mansoni is linked to dis-regulated transcription, translation and stem cell activities
KK Geyer, SE Munshi, M Vickers, M Squance, TJ Wilkinson, D Berrar, ...
International Journal for Parasitology: Drugs and Drug Resistance 8 (2), 213-222, 2018
Exploring and Expanding the Fatty-Acid-Binding Protein Superfamily in Fasciola Species
RM Morphew, TJ Wilkinson, N Mackintosh, V Jahndel, S Paterson, ...
Journal of proteome research 15 (9), 3308-3321, 2016
Distribution and Host Range of the Microsporidian Pleistophora mulleri
JE Ironside, TJ Wilkinson, J Rock
Journal of Eukaryotic Microbiology 55 (4), 355-362, 2008
Using ‘Omic approaches to compare temporal bacterial colonization of Lolium perenne, Lotus corniculatus, and Trifolium pratense in the rumen
CL Elliott, JE Edwards, TJ Wilkinson, GG Allison, K McCaffrey, MB Scott, ...
Frontiers in microbiology 9, 2184, 2018
Accumulation and exchange of parasites during adaptive radiation in an ancient lake
JE Ironside, TJ Wilkinson
International journal for parasitology 48 (3-4), 297-307, 2018
Characterization of the microbiome along the gastrointestinal tract of growing turkeys. Front Microbiol 8: 1089
TJ Wilkinson, AA Cowan, HE Vallin, LA Onime, LB Oyama, SJ Cameron, ...
Using next-generation sequencing to determine diversity of horse intestinal worms: identifying the equine ‘nemabiome’
CJ Mitchell, CM O’SULLIVAN, E Pinloche, T Wilkinson, RM Morphew, ...
Journal of equine science 30 (1), 1-5, 2019
1200 high-quality metagenome-assembled genomes from the rumen of African cattle and their relevance in the context of sub-optimal feeding
T Wilkinson, D Korir, M Ogugo, RD Stewart, M Watson, E Paxton, J Goopy, ...
Genome biology 21 (1), 1-25, 2020
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