|An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar|
ND Grubaugh, K Gangavarapu, J Quick, NL Matteson, JG De Jesus, ...
Genome biology 20 (1), 1-19, 2019
|Human muscle satellite cells as targets of Chikungunya virus infection|
S Ozden, M Huerre, JP Riviere, LL Coffey, PV Afonso, V Mouly, ...
PloS one 2 (6), e527, 2007
|Arbovirus high fidelity variant loses fitness in mosquitoes and mice|
LL Coffey, Y Beeharry, AV Bordería, H Blanc, M Vignuzzi
Proceedings of the National Academy of Sciences 108 (38), 16038-16043, 2011
|The perils of pathogen discovery: origin of a novel parvovirus-like hybrid genome traced to nucleic acid extraction spin columns|
SN Naccache, AL Greninger, D Lee, LL Coffey, T Phan, A Rein-Weston, ...
Journal of virology 87 (22), 11966-11977, 2013
|West Nile virus in Mexico: evidence of widespread circulation since July 2002.|
JG Estrada-Franco, R Navarro-Lopez, DWC Beasley, L Coffey, ...
Emerging infectious diseases 9 (12), 1604, 2003
|Reorganization and expansion of the nidoviral family Arteriviridae|
JH Kuhn, M Lauck, AL Bailey, AM Shchetinin, TV Vishnevskaya, Y Bào, ...
Archives of virology 161 (3), 755-768, 2016
|Arbovirus evolution in vivo is constrained by host alternation|
LL Coffey, N Vasilakis, AC Brault, AM Powers, F Tripet, SC Weaver
Proceedings of the National Academy of Sciences 105 (19), 6970-6975, 2008
|Chikungunya virus–vector interactions|
LL Coffey, AB Failloux, SC Weaver
Viruses 6 (11), 4628-4663, 2014
|Host alternation of chikungunya virus increases fitness while restricting population diversity and adaptability to novel selective pressures|
LL Coffey, M Vignuzzi
Journal of virology 85 (2), 1025-1035, 2011
|Mechanism of dengue virus broad cross-neutralization by a monoclonal antibody|
JJB Cockburn, MEN Sanchez, N Fretes, A Urvoas, I Staropoli, CM Kikuti, ...
Structure 20 (2), 303-314, 2012
|Factors shaping the adaptive landscape for arboviruses: implications for the emergence of disease|
LL Coffey, N Forrester, K Tsetsarkin, N Vasilakis, SC Weaver
Future microbiology 8 (2), 155-176, 2013
|Human genetic determinants of dengue virus susceptibility|
LL Coffey, E Mertens, AC Brehin, MD Fernandez-Garcia, A Amara, ...
Microbes and infection 11 (2), 143-156, 2009
|Dengue emergence and adaptation to peridomestic mosquitoes|
AC Moncayo, Z Fernandez, D Ortiz, M Diallo, A Sall, S Hartman, CT Davis, ...
Emerging infectious diseases 10 (10), 1790, 2004
|Potential role of sylvatic and domestic African mosquito species in dengue emergence|
M Diallo, AA Sall, AC Moncayo, Y Ba, Z Fernandez, D Ortiz, LL Coffey, ...
The American journal of tropical medicine and hygiene 73 (2), 445-449, 2005
|Enhanced arbovirus surveillance with deep sequencing: Identification of novel rhabdoviruses and bunyaviruses in Australian mosquitoes|
LL Coffey, BL Page, AL Greninger, BL Herring, RC Russell, SL Doggett, ...
Virology 448, 146-158, 2014
|Quenching of unincorporated amplification signal reporters in reverse-transcription loop-mediated isothermal amplification enabling bright, single-step, closed-tube, and …|
CS Ball, YK Light, CY Koh, SS Wheeler, LL Coffey, RJ Meagher
Analytical chemistry 88 (7), 3562-3568, 2016
|Emergence and transmission of arbovirus evolutionary intermediates with epidemic potential|
KA Stapleford, LL Coffey, S Lay, AV Bordería, V Duong, O Isakov, ...
Cell host & microbe 15 (6), 706-716, 2014
|Aedes aegypti saliva alters leukocyte recruitment and cytokine signaling by antigen-presenting cells during West Nile virus infection|
BS Schneider, L Soong, LL Coffey, HL Stevenson, CE McGee, S Higgs
PloS one 5 (7), e11704, 2010
|Zika virus tissue and blood compartmentalization in acute infection of rhesus macaques|
LL Coffey, PA Pesavento, RI Keesler, A Singapuri, J Watanabe, ...
PloS one 12 (1), e0171148, 2017
|ICTV virus taxonomy profile: Togaviridae|
R Chen, S Mukhopadhyay, A Merits, B Bolling, F Nasar, LL Coffey, ...
Journal of General Virology 99 (6), 761-762, 2018