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Eda Koculi
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Initial sequencing and analysis of the human genome
IHGS Consortium
Nature 409 (6822), 860-921, 2001
30075*2001
The DNA sequence of human chromosome 22
I Dunham, AR Hunt, JE Collins, R Bruskiewich, DM Beare, M Clamp, ...
Nature 402 (6761), 489-495, 1999
14751999
Charge density of divalent metal cations determines RNA stability
E Koculi, C Hyeon, D Thirumalai, SA Woodson
Journal of the American Chemical Society 129 (9), 2676-2682, 2007
1782007
Folding of the Tetrahymena Ribozyme by Polyamines: Importance of Counterion Valence and Size
E Koculi, NK Lee, D Thirumalai, SA Woodson
Journal of molecular biology 341 (1), 27-36, 2004
812004
A novel member of the WD-repeat gene family, WDR11, maps to the 10q26 region and is disrupted by a chromosome translocation in human glioblastoma cells
OB Chernova, A Hunyadi, E Malaj, H Pan, C Crooks, B Roe, JK Cowell
Oncogene 20 (38), 5378-5392, 2001
702001
WAVE3, an actin-polymerization gene, is truncated and inactivated as a result of a constitutional t (1; 13)(q21; q12) chromosome translocation in a patient with …
K Sossey-Alaoui, G Su, E Malaj, B Roe, JK Cowell
Oncogene 21 (38), 5967-5974, 2002
672002
Counterion charge density determines the position and plasticity of RNA folding transition states
E Koculi, D Thirumalai, SA Woodson
Journal of molecular biology 359 (2), 446-454, 2006
612006
Analysis of RNA folding by native polyacrylamide gel electrophoresis
SA Woodson, E Koculi
Methods in enzymology 469, 189-208, 2009
502009
Folding path of P5abc RNA involves direct coupling of secondary and tertiary structures
E Koculi, SS Cho, R Desai, D Thirumalai, SA Woodson
Nucleic acids research 40 (16), 8011-8020, 2012
432012
Chromosome evolution: the junction of mammalian chromosomes in the formation of mouse chromosome 10
MT Pletcher, BA Roe, F Chen, T Do, A Do, E Malaj, RH Reeves
Genome research 10 (10), 1463-1467, 2000
402000
Cold-adaptation in Sea-water-borne Signal Proteins: Sequence and NMR Structure of the Pheromone En-6 from the Antarctic Ciliate Euplotes nobilii
B Pedrini, WJ Placzek, E Koculi, C Alimenti, A LaTerza, P Luporini, ...
Journal of molecular biology 372 (2), 277-286, 2007
282007
Nuclear magnetic resonance spectroscopy with the stringent substrate rhodanese bound to the single‐ring variant SR1 of the E. coli chaperonin GroEL
E Koculi, R Horst, AL Horwich, K Wüthrich
Protein Science 20 (8), 1380-1386, 2011
232011
A transcription map of the minimally deleted region from 13q14 in B-cell chronic lymphocytic leukemia as defined by large scale sequencing of the 650 kb critical region
E Kitamura, G Su, K Sossey-Alaoui, E Malaj, J Lewis, HQ Pan, ...
Oncogene 19 (50), 5772-5780, 2000
212000
Selective nano-sensing approach for the determination of inorganic phosphate in human urine samples
AA Fadhel, M Johnson, K Trieu, E Koculi, AD Campiglia
Talanta 164, 209-215, 2017
202017
Time course of large ribosomal subunit assembly in E. coli cells overexpressing a helicase inactive DbpA protein
RC Gentry, JJ Childs, J Gevorkyan, YV Gerasimova, E Koculi
RNA 22 (7), 1055-1064, 2016
152016
DbpA is a region‐specific RNA helicase
AFT Moore, RC Gentry, E Koculi
Biopolymers 107 (3), e23001, 2017
82017
The DbpA catalytic core unwinds double-helix substrates by directly loading on them
JJ Childs, RC Gentry, AFT Moore, E Koculi
RNA 22 (3), 408-415, 2016
72016
Retardation of folding rates of substrate proteins in the nanocage of GroEL
E Koculi, D Thirumalai
Biochemistry 60 (6), 460-464, 2021
62021
Kinetics and thermodynamics of DbpA protein’s C-terminal domain interaction with RNA
A López de Victoria, AFT Moore, AG Gittis, E Koculi
ACS omega 2 (11), 8033-8038, 2017
42017
RNA Post-Transcriptional Modifications in Two Large Subunit Intermediates Populated in E. coli Cells Expressing Helicase Inactive R331A DbpA
E Koculi, SS Cho
Biochemistry 61 (10), 833-842, 2022
32022
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