| D3R Grand Challenge 2: blind prediction of protein–ligand poses, affinity rankings, and relative binding free energies Z Gaieb, S Liu, S Gathiaka, M Chiu, H Yang, C Shao, VA Feher, ... Journal of computer-aided molecular design 32 (1), 1-20, 2018 | 120 | 2018 |
| Beyond Shielding: The Roles of Glycans in the SARS-CoV-2 Spike Protein L Casalino, Z Gaieb, JA Goldsmith, CK Hjorth, AC Dommer, AM Harbison, ... ACS Central Science, 2020 | 106* | 2020 |
| D3R Grand Challenge 3: blind prediction of protein–ligand poses and affinity rankings Z Gaieb, CD Parks, M Chiu, H Yang, C Shao, WP Walters, MH Lambert, ... Journal of computer-aided molecular design 33 (1), 1-18, 2019 | 64 | 2019 |
| D3R grand challenge 4: blind prediction of protein–ligand poses, affinity rankings, and relative binding free energies CD Parks, Z Gaieb, M Chiu, H Yang, C Shao, WP Walters, JM Jansen, ... Journal of Computer-Aided Molecular Design 34 (2), 99-119, 2020 | 15 | 2020 |
| Molecular Mechanism of Biased Ligand Conformational Changes in CC Chemokine Receptor 7 Z Gaieb, DD Lo, D Morikis Journal of Chemical Information and Modeling 56 (9), 1808-1822, 2016 | 12 | 2016 |
| A multiscale coarse-grained model of the SARS-CoV-2 virion A Yu, AJ Pak, P He, V Monje-Galvan, L Casalino, Z Gaieb, AC Dommer, ... Biophysical journal, 2020 | 11 | 2020 |
| The flexibility of ACE2 in the context of SARS-CoV-2 infection EP Barros, L Casalino, Z Gaieb, AC Dommer, Y Wang, L Fallon, ... Biophysical Journal, 2020 | 11 | 2020 |
| Simulations support the interaction of the SARS-CoV-2 spike protein with nicotinic acetylcholine receptors and suggest subtype specificity AS Oliveira, AA Ibarra, I Bermudez, L Casalino, Z Gaieb, DK Shoemark, ... bioRxiv, 2020 | 10 | 2020 |
| Detection of Side Chain Rearrangements Mediating the Motions of Transmembrane Helices in Molecular Dynamics Simulations of G Protein-Coupled Receptors Z Gaieb, D Morikis Computational and Structural Biotechnology Journal 15, 131-137, 2017 | 6 | 2017 |
| AI-Driven Multiscale Simulations Illuminate Mechanisms of SARS-CoV-2 Spike Dynamics L Casalino, AC Dommer, Z Gaieb, EP Barros, T Sztain, SH Ahn, A Trifan, ... bioRxiv, 2020 | 4 | 2020 |
| Conformational heterogeneity in CCR7 undergoes transitions to specific states upon ligand binding Z Gaieb, D Morikis Journal of Molecular Graphics and Modelling 74, 352-358, 2017 | 3 | 2017 |
| An Analysis of Proteochemometric and Conformal Prediction Machine Learning Protein-Ligand Binding Affinity Models C Parks, Z Gaieb, RE Amaro Frontiers in molecular biosciences 7, 93, 2020 | 1 | 2020 |
| Machine learning for acute oral system toxicity regression and classification C Parks, Z Gaieb, R Amaro ChemRxiv. doi 10, 2019 | 1 | 2019 |
| Dual Inhibitors of Cyclooxygenase‐2 and Soluble Epoxide Hydrolase: Studies of Binding Modes at the Active Sites and Time‐dependency of Inhibition, and Development of Water … SH Hwang, Z Gaieb, C Morisseau, J Yang, K Wagner, MK Gilson, ... The FASEB Journal 32, 558.2-558.2, 2018 | 1 | 2018 |
| Molecular Switches Coordinate Dynamically Coupled Allosteric Networks in Protein Complexes Z Gaieb UNIVERSITY OF CALIFORNIA, RIVERSIDE, 2016 | 1 | 2016 |
| Electrostatic Interactions between Complement Regulator CD46 (SCR1-2) and Adenovirus Ad11/Ad21 Fiber Protein Knob CZ Chen, RD Gorham, Z Gaieb, D Morikis Molecular biology international 2015, 2015 | 1 | 2015 |
| SARS-CoV-2 Glycosylated Spike Activation Mechanism-Simulations of the Full Unbiased Pathway T Sztain-Pedone, SH Ahn, A Bogetti, L Casalino, Z Gaieb, JA McCammon, ... Biophysical Journal 120 (3), 276a, 2021 | | 2021 |
| Simulations support the interaction of the SARS-CoV-2 spike protein with nicotinic acetylcholine receptors AS F. Oliveira, AA Ibarra, I Bermudez, L Casalino, Z Gaieb, DK Shoemark, ... bioRxiv, 2020.07. 16.206680, 2020 | | 2020 |
| Disease related mutations in PI3Kγ disrupt regulatory C-terminal dynamics and reveals a path to selective inhibitors MK Rathinaswamy, Z Gaieb, KD Fleming, C Borsari, NJ Harris, ... bioRxiv, 2020 | | 2020 |
| Comparison of commonly used solid tumor targeted gene sequencing panels for estimating tumor mutation burden shows analytical and prognostic concordance within the cancer … N Bevins, S Sun, Z Gaieb, JA Thorson, SS Murray Journal for Immunotherapy of Cancer 8 (1), 2020 | | 2020 |
Dimitrios MorikisProfessor of Bioengineering, University of California, RiversideVerified email at ucr.edu
