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Umberto Lupo
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giotto-tda: A Topological Data Analysis Toolkit for Machine Learning and Data Exploration
G Tauzin, U Lupo, L Tunstall, JB Pérez, M Caorsi, AM Medina-Mardones, ...
J. Mach. Learn. Res. 22, 39:1-39:6, 2021
1502021
On the structure and topography of free-standing chemically modified graphene
NR Wilson, PA Pandey, R Beanland, JP Rourke, U Lupo, G Rowlands, ...
New Journal of Physics 12 (12), 125010, 2010
552010
Protein language models trained on multiple sequence alignments learn phylogenetic relationships
U Lupo, D Sgarbossa, AF Bitbol
Nature Communications 13 (1), 6298, 2022
242022
Generative power of a protein language model trained on multiple sequence alignments
D Sgarbossa, U Lupo, AF Bitbol
Elife 12, e79854, 2023
222023
ICLR 2021 Challenge for Computational Geometry & Topology: Design and Results
N Miolane, M Caorsi, U Lupo, M Guerard, N Guigui, J Mathe, Y Cabanes, ...
arXiv preprint arXiv:2108.09810, 2021
162021
giotto-ph: A Python Library for High-Performance Computation of Persistent Homology of Vietoris-Rips Filtrations
JB Pérez, S Hauke, U Lupo, M Caorsi, A Dassatti
arXiv preprint arXiv:2107.05412, 2021
162021
Non-existence of isometry-invariant Hadamard states for a Kruskal black hole in a box and for massless fields on 1+ 1 Minkowski spacetime with a uniformly accelerating mirror
BS Kay, U Lupo
Classical and Quantum Gravity 33 (21), 215001, 2016
142016
Persistence Steenrod modules
U Lupo, AM Medina-Mardones, G Tauzin
Journal of Applied and Computational Topology 6 (4), 475-502, 2022
82022
Aspects of (quantum) field theory on curved spacetimes, particularly in the presence of boundaries
U Lupo
University of York, 2015
82015
ICLR 2022 Challenge for Computational Geometry & Topology: Design and Results
A Myers, S Utpala, S Talbar, S Sanborn, C Shewmake, C Donnat, J Mathe, ...
Topological, Algebraic and Geometric Learning Workshops 2022, 269-276, 2022
42022
On the global "two-sided" characteristic Cauchy problem for linear wave equations on manifolds
U Lupo
Letters in Mathematical Physics, 2018
42018
Impact of phylogeny on structural contact inference from protein sequence data
N Dietler, U Lupo, AF Bitbol
Journal of the Royal Society Interface 20 (199), 20220707, 2023
22023
Pairing interacting protein sequences using masked language modeling
U Lupo, D Sgarbossa, AF Bitbol
bioRxiv, 2023.08. 14.553209, 2023
22023
Predicting interaction partners using masked language modeling
U Lupo, D Sgarbossa, AF Bitbol
2022
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Articles 1–14