| Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers Y Fu, PH Wu, T Beane, PD Zamore, Z Weng BMC genomics 19, 1-14, 2018 | 159 | 2018 |
| The evolutionarily conserved piRNA-producing locus pi6 is required for male mouse fertility PH Wu, Y Fu, K Cecchini, DM Özata, A Arif, T Yu, C Colpan, I Gainetdinov, ... Nature genetics 52 (7), 728-739, 2020 | 106 | 2020 |
| The genome of the Hi5 germ cell line from Trichoplusia ni, an agricultural pest and novel model for small RNA biology Y Fu, Y Yang, H Zhang, G Farley, J Wang, KA Quarles, Z Weng, ... Elife 7, e31628, 2018 | 79 | 2018 |
| A small-molecule SUMOylation inhibitor activates antitumor immune responses and potentiates immune therapies in preclinical models ES Lightcap, P Yu, S Grossman, K Song, M Khattar, K Xega, X He, ... Science translational medicine 13 (611), eaba7791, 2021 | 57 | 2021 |
| Subsets of mononuclear phagocytes are enriched in the inflamed colons of patients with IBD H Liu, S Dasgupta, Y Fu, B Bailey, C Roy, E Lightcap, B Faustin BMC immunology 20, 1-18, 2019 | 53 | 2019 |
| Predicting human splicing branchpoints by combining sequence-derived features and multi-label learning methods W Zhang, X Zhu, Y Fu, J Tsuji, Z Weng BMC bioinformatics 18, 1-11, 2017 | 25 | 2017 |
| The temporal landscape of recursive splicing during Pol II transcription elongation in human cells XO Zhang, Y Fu, H Mou, W Xue, Z Weng PLoS Genetics 14 (8), e1007579, 2018 | 24 | 2018 |
| Intramolecular oxidative palladium-catalyzed amination involving double C–H functionalization of unactivated olefins G Broggini, T Borelli, S Giofré, A Mazza Synthesis 49 (13), 2803-2818, 2017 | 24 | 2017 |
| Sequencing by avidity enables high accuracy with low reagent consumption S Arslan, FJ Garcia, M Guo, MW Kellinger, S Kruglyak, JA LeVieux, ... Nature biotechnology 42 (1), 132-138, 2024 | 22 | 2024 |
| Long first exons and epigenetic marks distinguish conserved pachytene piRNA clusters from other mammalian genes T Yu, K Fan, DM Özata, G Zhang, Y Fu, WE Theurkauf, PD Zamore, ... Nature communications 12 (1), 73, 2021 | 19 | 2021 |
| Circulating cell-free tumor DNA in advanced pancreatic adenocarcinoma identifies patients with worse overall survival G Botrus, PLS Uson Junior, P Raman, AE Kaufman, H Kosiorek, J Yin, ... Frontiers in oncology 11, 794009, 2022 | 12 | 2022 |
| The prediction of human splicing branchpoints by multi-label learning W Zhang, X Zhu, Y Fu, J Tsuji, Z Weng 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2016 | 10 | 2016 |
| Serial cell-free DNA (cfDNA) sampling in advanced pancreatic ductal adenocarcinoma (PDAC) patients may predict therapeutic outcome. G Botrus, Y Fu, MB Sonbol, L Drusbosky, DH Ahn, MJ Borad, JS Starr, ... Journal of Clinical Oncology 39 (3_suppl), 423-423, 2021 | 3 | 2021 |
| BRCA1 promoter methylation in sporadic breast cancer patients detected by liquid biopsy J Yen, S Chen, C Jenkins, LM Drusbosky, B Overstreet, J Zhao, Y Fu, ... chemotherapy 1 (2), 3, 2023 | | 2023 |
| Validation of a bioinformatic model for classifying non-tumor variants in a cell-free DNA liquid biopsy assay J Yen, P Safabakhsh, JL Werbin, D Tolkunov, Y Fu, K Quinn, R Foley, ... Cancer Research 83 (7_Supplement), 3135-3135, 2023 | | 2023 |
| Identification of homologous recombination and repair (HRR) deficiency using circulating tumor DNA (ctDNA) in advanced prostate cancer (aPC). LA Bucheit, J Yen, L Drusbosky, C Barbacioru, S Gnerre, H Wang, ... Journal of Clinical Oncology 40 (6_suppl), 180-180, 2022 | | 2022 |
| Analytical and clinical validation of a ctDNA assay for detecting copy number loss and structural rearrangement variants contributing to homologous recombination and repair … J Yen, L Drusbosky, C Weipert, N Zhang, D Hanna, C Barbacioru, ... CANCER RESEARCH 82 (4), 2022 | | 2022 |
| Abstract P5-13-29: Analytical and clinical validation of a ctDNA assay for detecting copy number loss and structural rearrangement variants contributing to homologous … J Yen, L Drusbosky, C Weipert, N Zhang, D Hanna, C Barbacioru, ... Cancer Research 82 (4_Supplement), P5-13-29-P5-13-29, 2022 | | 2022 |
| Reversion patterns in homologous recombination repair genes in metastatic cancer patients profiled by cell-free DNA Y Fu, J Yen, A Aartyomenko, S Gnerre, C Weiport, E Helman, ... Cancer Research 81 (13_Supplement), 25-25, 2021 | | 2021 |
| Immune Landscape in the Inflamed Colonic Mucosa of Patients with IBD H Liu, S Dasgupta, Y Fu, B Bailey, C Roy, E Lightcap, B Faustin | | 2020 |
