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Bryce E Nickels
Bryce E Nickels
Professor of Genetics, Rutgers University
Verified email at waksman.rutgers.edu
Title
Cited by
Cited by
Year
CarD is an essential regulator of rRNA transcription required for Mycobacterium tuberculosis persistence
CL Stallings, NC Stephanou, L Chu, A Hochschild, BE Nickels, ...
Cell 138 (1), 146-159, 2009
2672009
Structural basis for bacterial transcription-coupled DNA repair
AM Deaconescu, AL Chambers, AJ Smith, BE Nickels, A Hochschild, ...
Cell 124 (3), 507-520, 2006
2432006
5′ end nicotinamide adenine dinucleotide cap in human cells promotes RNA decay through DXO-mediated deNADding
X Jiao, SK Doamekpor, JG Bird, BE Nickels, L Tong, RP Hart, M Kiledjian
Cell 168 (6), 1015-1027. e10, 2017
2332017
The mechanism of RNA 5′ capping with NAD+, NADH and desphospho-CoA
JG Bird, Y Zhang, Y Tian, N Panova, I Barvík, L Greene, M Liu, B Buckley, ...
Nature 535 (7612), 444-447, 2016
2142016
A role for interaction of the RNA polymerase flap domain with the σ subunit in promoter recognition
K Kuznedelov, L Minakhin, A Niedziela-Majka, SL Dove, D Rogulja, ...
Science 295 (5556), 855-857, 2002
2052002
Interactions between RNA polymerase and the “core recognition element” counteract pausing
IO Vvedenskaya, H Vahedian-Movahed, JG Bird, JG Knoblauch, ...
Science 344 (6189), 1285-1289, 2014
1892014
Direct detection of abortive RNA transcripts in vivo
SR Goldman, RH Ebright, BE Nickels
Science 324 (5929), 927-928, 2009
1652009
NanoRNAs prime transcription initiation in vivo
SR Goldman, JS Sharp, IO Vvedenskaya, J Livny, SL Dove, BE Nickels
Molecular cell 42 (6), 817-825, 2011
1342011
An RNA-seq method for defining endoribonuclease cleavage specificity identifies dual rRNA substrates for toxin MazF-mt3
JM Schifano, IO Vvedenskaya, JG Knoblauch, M Ouyang, BE Nickels, ...
Nature communications 5 (1), 3538, 2014
1172014
Cofactor requirements and reconstitution of microcin B17 synthetase: a multienzyme complex that catalyzes the formation of oxazoles and thiazoles in the antibiotic microcin B17
JC Milne, RS Roy, AC Eliot, NL Kelleher, A Wokhlu, B Nickels, CT Walsh
Biochemistry 38 (15), 4768-4781, 1999
1111999
Structure of a ternary transcription activation complex
D Jain, BE Nickels, L Sun, A Hochschild, SA Darst
Molecular cell 13 (1), 45-53, 2004
1102004
tRNA is a new target for cleavage by a MazF toxin
JM Schifano, JW Cruz, IO Vvedenskaya, R Edifor, M Ouyang, RN Husson, ...
Nucleic acids research 44 (3), 1256-1270, 2016
1072016
The interaction between σ70 and the β-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation
BE Nickels, SJ Garrity, V Mekler, L Minakhin, K Severinov, RH Ebright, ...
Proceedings of the National Academy of Sciences 102 (12), 4488-4493, 2005
1042005
Protein–protein and protein–DNA interactions of σ70 region 4 involved in transcription activation by λcI
BE Nickels, SL Dove, KS Murakami, SA Darst, A Hochschild
Journal of molecular biology 324 (1), 17-34, 2002
1042002
The σ70 subunit of RNA polymerase mediates a promoter-proximal pause at the lac promoter
BE Nickels, J Mukhopadhyay, SJ Garrity, RH Ebright, A Hochschild
Nature structural & molecular biology 11 (6), 544-550, 2004
1032004
Growth-regulating Mycobacterium tuberculosis VapC-mt4 toxin is an isoacceptor-specific tRNase
JW Cruz, JD Sharp, ED Hoffer, T Maehigashi, IO Vvedenskaya, ...
Nature communications 6 (1), 7480, 2015
982015
Regulation of RNA polymerase through the secondary channel
BE Nickels, A Hochschild
Cell 118 (3), 281-284, 2004
892004
Structural basis for the bacterial transcription-repair coupling factor/RNA polymerase interaction
LF Westblade, EA Campbell, C Pukhrambam, JC Padovan, BE Nickels, ...
Nucleic acids research 38 (22), 8357-8369, 2010
832010
Highly efficient 5' capping of mitochondrial RNA with NAD+ and NADH by yeast and human mitochondrial RNA polymerase
JG Bird, U Basu, D Kuster, A Ramachandran, E Grudzien-Nogalska, ...
Elife 7, e42179, 2018
802018
CapZyme-seq comprehensively defines promoter-sequence determinants for RNA 5′ capping with NAD+
IO Vvedenskaya, JG Bird, Y Zhang, Y Zhang, X Jiao, I Barvík, L Krásný, ...
Molecular Cell 70 (3), 553-564. e9, 2018
782018
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