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Jason Pell
Jason Pell
Software Engineer, IMC Trading
E-mail confirmado em msu.edu
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The khmer software package: enabling efficient nucleotide sequence analysis
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
F1000Research 4, 2015
372*2015
Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
J Pell, A Hintze, R Canino-Koning, A Howe, JM Tiedje, CT Brown
Proc. Natl. Acad. Sci. U.S.A. 109 (33), 13272-13277, 2012
2812012
The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus
EM Schwarz, PK Korhonen, BE Campbell, ND Young, AR Jex, A Jabbar, ...
Genome biology 14, 1-18, 2013
2302013
These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure
Q Zhang, J Pell, R Canino-Koning, AC Howe, CT Brown
PloS one 9 (7), e101271, 2014
952014
The khmer software package: enabling efficient sequence analysis
M Crusoe, G Edvenson, J Fish, A Howe, E McDonald, J Nahum, ...
URL http://dx. doi. org/10.6084/m9. figshare 979190, 2014
262014
Illumina sequencing artifacts revealed by connectivity analysis of metagenomic datasets
AC Howe, J Pell, R Canino-Koning, R Mackelprang, S Tringe, J Jansson, ...
arXiv preprint arXiv:1212.0159, 2012
62012
khmer k-mer counting & filtering FTW
MR Crusoe, G Edvenson, J Fish, A Howe, L Irber, E McDonald, J Nahum, ...
62010
Approaches to Scaling and Improving Metagenome Sequence Assembly
JA Pell
Michigan State University. Computer Science, 2013
2013
The khmer software package: enabling efficient nucleotide
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
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