Andrea Zuccolo
Andrea Zuccolo
Scuola Superiore Sant'Anna, Pisa
Verified email at appliedgenomics.org
Title
Cited by
Cited by
Year
The B73 maize genome: complexity, diversity, and dynamics
PS Schnable, D Ware, RS Fulton, JC Stein, F Wei, S Pasternak, C Liang, ...
science 326 (5956), 1112-1115, 2009
36882009
Human gut microbiota in obesity and after gastric bypass
H Zhang, JK DiBaise, A Zuccolo, D Kudrna, M Braidotti, Y Yu, ...
Proceedings of the National Academy of Sciences 106 (7), 2365-2370, 2009
17732009
A physical, genetic and functional sequence assembly of the barley genome
International Barley Genome Sequencing Consortium
Nature 491 (7426), 711, 2012
12012012
The Norway spruce genome sequence and conifer genome evolution
B Nystedt, NR Street, A Wetterbom, A Zuccolo, YC Lin, DG Scofield, ...
Nature 497 (7451), 579-584, 2013
11732013
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
I Verde, AG Abbott, S Scalabrin, S Jung, S Shu, F Marroni, ...
Nature genetics 45 (5), 487-494, 2013
8422013
Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize
M Morgante, S Brunner, G Pea, K Fengler, A Zuccolo, A Rafalski
Nature genetics 37 (9), 997-1002, 2005
5142005
Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
GA Wu, S Prochnik, J Jenkins, J Salse, U Hellsten, F Murat, X Perrier, ...
Nature biotechnology 32 (7), 656-662, 2014
4422014
The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication
M Wang, Y Yu, G Haberer, PR Marri, C Fan, JL Goicoechea, A Zuccolo, ...
Nature genetics 46 (9), 982-988, 2014
2732014
The rice annotation project database (RAP-DB): 2008 update
Rice Annotation Project
Nucleic Acids Research 36 (suppl_1), D1028-D1033, 2007
2712007
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
JC Stein, Y Yu, D Copetti, DJ Zwickl, L Zhang, C Zhang, K Chougule, ...
Nature genetics 50 (2), 285-296, 2018
2082018
Dynamic evolution of Oryza genomes is revealed by comparative genomic analysis of a genus-wide vertical data set
JSS Ammiraju, F Lu, A Sanyal, Y Yu, X Song, N Jiang, AC Pontaroli, ...
The Plant Cell 20 (12), 3191-3209, 2008
1222008
Transposable element distribution, abundance and role in genome size variation in the genus Oryza
A Zuccolo, A Sebastian, J Talag, Y Yu, HR Kim, K Collura, D Kudrna, ...
BMC Evolutionary Biology 7 (1), 1-15, 2007
1082007
Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza
JSS Ammiraju, A Zuccolo, Y Yu, X Song, B Piegu, F Chevalier, JG Walling, ...
The Plant Journal 52 (2), 342-351, 2007
942007
BAC-end sequence analysis and a draft physical map of the common bean (Phaseolus vulgaris L.) genome
JA Schlueter, JL Goicoechea, K Collura, N Gill, JY Lin, Y Yu, D Kudrna, ...
Tropical Plant Biology 1 (1), 40-48, 2008
762008
The Amborella genome: an evolutionary reference for plant biology
DE Soltis, VA Albert, J Leebens-Mack, JD Palmer, RA Wing, WP Claude, ...
Genome biology 9 (3), 1-6, 2008
612008
RetrOryza: a database of the rice LTR-retrotransposons
C Chaparro, R Guyot, A Zuccolo, B Piégu, O Panaud
Nucleic acids research 35 (suppl_1), D66-D70, 2007
582007
RiTE database: a resource database for genus-wide rice genomics and evolutionary biology
D Copetti, J Zhang, M El Baidouri, D Gao, J Wang, E Barghini, RM Cossu, ...
BMC genomics 16 (1), 1-10, 2015
542015
A draft physical map of a D-genome cotton species (Gossypium raimondii)
L Lin, GJ Pierce, JE Bowers, JC Estill, RO Compton, LK Rainville, C Kim, ...
BMC genomics 11 (1), 1-17, 2010
542010
Structured motifs search
M Morgante, A Policriti, N Vitacolonna, A Zuccolo
Journal of Computational Biology 12 (8), 1065-1082, 2005
492005
Rice structural variation: a comparative analysis of structural variation between rice and three of its closest relatives in the genus Oryza
BL Hurwitz, D Kudrna, Y Yu, A Sebastian, A Zuccolo, SA Jackson, D Ware, ...
The Plant Journal 63 (6), 990-1003, 2010
462010
The system can't perform the operation now. Try again later.
Articles 1–20