Sergey Nikolaev
Sergey Nikolaev
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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
Exome sequencing identifies recurrent somatic MAP2K1 and MAP2K2 mutations in melanoma
SI Nikolaev, D Rimoldi, C Iseli, A Valsesia, D Robyr, C Gehrig, ...
Nature genetics 44 (2), 133-139, 2012
Phylogenomics reshuffles the eukaryotic supergroups
F Burki, K Shalchian-Tabrizi, M Minge, Å Skjæveland, SI Nikolaev, ...
PloS one 2 (8), e790, 2007
Genomic analysis identifies new drivers and progression pathways in skin basal cell carcinoma
X Bonilla, L Parmentier, B King, F Bezrukov, G Kaya, V Zoete, ...
Nature genetics 48 (4), 398-406, 2016
Somatic Activating KRAS Mutations in Arteriovenous Malformations of the Brain
SI Nikolaev, S Vetiska, X Bonilla, E Boudreau, S Jauhiainen, ...
New England Journal of Medicine 378 (3), 250-261, 2018
Association of checkpoint inhibitor–induced toxic effects with shared cancer and tissue antigens in non–small cell lung cancer
F Berner, D Bomze, S Diem, OH Ali, M Fässler, S Ring, R Niederer, ...
JAMA oncology 5 (7), 1043-1047, 2019
The twilight of Heliozoa and rise of Rhizaria, an emerging supergroup of amoeboid eukaryotes
SI Nikolaev, C Berney, JF Fahrni, I Bolivar, S Polet, AP Mylnikov, ...
Proceedings of the National Academy of Sciences 101 (21), 8066-8071, 2004
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
EH Margulies, GM Cooper, G Asimenos, DJ Thomas, CN Dewey, A Siepel, ...
Genome research 17 (6), 760-774, 2007
APOBEC-induced mutations in human cancers are strongly enriched on the lagging DNA strand during replication
VB Seplyarskiy, RA Soldatov, KY Popadin, SE Antonarakis, GA Bazykin, ...
Genome research 26 (2), 174-182, 2016
Deep phylogeny and evolution of slime moulds (Mycetozoa)
AM Fiore-Donno, SI Nikolaev, M Nelson, J Pawlowski, T Cavalier-Smith, ...
Protist 161 (1), 55-70, 2010
Phylogeny of novel naked filose and reticulose Cercozoa: Granofilosea cl. n. and Proteomyxidea revised
D Bass, EEY Chao, S Nikolaev, A Yabuki, K Ishida, C Berney, U Pakzad, ...
Protist 160 (1), 75-109, 2009
Responsiveness to anti-PD-1 and anti-CTLA-4 immune checkpoint blockade in SB28 and GL261 mouse glioma models
V Genoud, E Marinari, SI Nikolaev, JC Castle, V Bukur, PY Dietrich, ...
Oncoimmunology 7 (12), e1501137, 2018
The testate lobose amoebae (order Arcellinida Kent, 1880) finally find their home within Amoebozoa
SI Nikolaev, EAD Mitchell, NB Petrov, C Berney, J Fahrni, J Pawlowski
Protist 156 (2), 191-202, 2005
Early history of mammals is elucidated with the ENCODE multiple species sequencing data
S Nikolaev, JI Montoya-Burgos, EH Margulies, NCS Program, ...
PLoS genetics 3 (1), e2, 2007
Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements
SI Nikolaev, JI Montoya-Burgos, K Popadin, L Parand, EH Margulies, ...
Proceedings of the National Academy of Sciences 104 (51), 20443-20448, 2007
Circulating tumoral DNA: Preanalytical validation and quality control in a diagnostic laboratory
S Nikolaev, L Lemmens, T Koessler, JL Blouin, T Nouspikel
Analytical biochemistry 542, 34-39, 2018
Extrachromosomal driver mutations in glioblastoma and low-grade glioma
S Nikolaev, F Santoni, M Garieri, P Makrythanasis, E Falconnet, ...
Nature communications 5 (1), 5690, 2014
Exome sequencing identifies putative drivers of progression of transient myeloproliferative disorder to AMKL in infants with Down syndrome
SI Nikolaev, F Santoni, A Vannier, E Falconnet, E Giarin, G Basso, ...
Blood, The Journal of the American Society of Hematology 122 (4), 554-561, 2013
A single-nucleotide substitution mutator phenotype revealed by exome sequencing of human colon adenomas
SI Nikolaev, SK Sotiriou, IS Pateras, F Santoni, S Sougioultzis, H Edgren, ...
Cancer research 72 (23), 6279-6289, 2012
Phylogenetic position of Multicilia marina and the evolution of Amoebozoa
SI Nikolaev, C Berney, NB Petrov, AP Mylnikov, JF Fahrni, J Pawlowski
International journal of systematic and evolutionary microbiology 56 (6 …, 2006
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