| EGene: a configurable pipeline generation system for automated sequence analysis AM Durham, AY Kashiwabara, FTG Matsunaga, PH Ahagon, F Rainone, ... Bioinformatics 21 (12), 2812-2813, 2005 | 62 | 2005 |
| Characterization of SCAR markers of Eimeria spp. of domestic fowl and construction of a public relational database (The Eimeria SCARdb) S Fernandez, AM Katsuyama, AY Kashiwabara, AMBN Madeira, ... FEMS microbiology letters 238 (1), 183-188, 2004 | 41 | 2004 |
| DNA methylation landscape of hepatoblastomas reveals arrest at early stages of liver differentiation and cancer-related alterations M Maschietto, TC Rodrigues, AY Kashiwabara, ÉSS de Araujo, ... Oncotarget 8 (58), 97871, 2017 | 34 | 2017 |
| Sequence motif finder using memetic algorithm JM Caldonazzo Garbelini, AY Kashiwabara, DS Sanches BMC bioinformatics 19, 1-13, 2018 | 21 | 2018 |
| LINE-1 hypermethylation in peripheral blood of cutaneous melanoma patients is associated with metastasis ÉSS De Araújo, AY Kashiwabara, MIW Achatz, LF Moredo, BCS De Sá, ... Melanoma research 25 (2), 173-177, 2015 | 21 | 2015 |
| CodAn: predictive models for precise identification of coding regions in eukaryotic transcripts PG Nachtigall, AY Kashiwabara, AM Durham Briefings in bioinformatics 22 (3), bbaa045, 2021 | 20 | 2021 |
| Splice site prediction using stochastic regular grammars AY Kashiwabara, DCG Vieira, A Machado-Lima, AM Durham Genetics and Molecular Research 6 (1), 105-115, 2007 | 20 | 2007 |
| DNA Methylation Levels of Melanoma Risk Genes Are Associated with Clinical Characteristics of Melanoma Patients. ACVK Érica S. S. de Araújo, Dimitrius T. Pramio, André Y. Kashiwabara, Paula ... BioMed Research International 2015 (2015), 1-8, 2015 | 19 | 2015 |
| ToPS: a framework to manipulate probabilistic models of sequence data AY Kashiwabara, I Bonadio, V Onuchic, F Amado, R Mathias, AM Durham PLoS computational biology 9 (10), e1003234, 2013 | 14 | 2013 |
| A novel decomposing model with evolutionary algorithms for feature selection in long non-coding rnas RP Bonidia, JS Machida, TC Negri, WAL Alves, AY Kashiwabara, ... IEEE Access 8, 181683-181697, 2020 | 10 | 2020 |
| Epigenetic signature of differentially methylated genes in cutaneous melanoma DT Pramio, AY Kashiwabara, PC Pennacchi, MP Rivas, SS Maria-Engler, ... Applied Cancer Research 37, 1-5, 2017 | 7 | 2017 |
| Decreasing the number of false positives in sequence classification A Machado-Lima, AY Kashiwabara, AM Durham BMC genomics 11, 1-12, 2010 | 6 | 2010 |
| Aplicação da otimização por colônia de formigas ao problema de múltiplos caixeiros viajantes no atendimento de ordens de serviço nas empresas de distribuição de energia elétrica D Barbosa, A Kashiwabara Anais do XI Simpósio Brasileiro de Sistemas de Informaçao, 23-30, 2015 | 4 | 2015 |
| MYOP/ToPS/SGEval: Um ambiente computacional para estudo sistemático de predição de genes AY Kashiwabara Universidade de São Paulo, 2011 | 4 | 2011 |
| Discovery biological motifs using heuristics approaches JMC Garbelini, AY Kashiwabara, DS Sanches 2016 5th Brazilian Conference on Intelligent Systems (BRACIS), 175-180, 2016 | 3 | 2016 |
| Discovery motifs by evolutionary computation JC Garbelini, AY Kashiwabara, DS Sanches Proceedings of the 2016 on Genetic and Evolutionary Computation Conference …, 2016 | 3 | 2016 |
| Mining novel candidate imprinted genes using genome-wide methylation screening and literature review A Bonaldi, A Kashiwabara, ÉS de Araújo, LV Pereira, AR Paschoal, ... Epigenomes 1 (2), 13, 2017 | 2 | 2017 |
| A feature extraction approach based on complex networks for genomic sequences recognition BMM Conque, AY Kashiwabara, FM Lopes 2016 9th International Congress on Image and Signal Processing, BioMedical …, 2016 | 2 | 2016 |
| Applying a variation of the ant colony optimization algorithm to solve the multiple traveling salesmen problem to route the teams of the electric power distribution companies DF Barbosa, CN Silla Junior, AY Kashiwabara | 1 | 2015 |
| Feature extraction from complex networks: A case of study in genomic sequences classification BMM Conque, AY Kashiwabara, FM Lopes arXiv preprint arXiv:1412.5627, 2014 | 1 | 2014 |
Dirce Maria CarraroHead, Genomics and Molecular Biology Laboratory, AC Camargo HospitalVerified email at cipe.accamargo.org.br
