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Mehmet Koyutürk
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Comparative analysis of algorithms for next-generation sequencing read alignment
M Ruffalo, T LaFramboise, M Koyutürk
Bioinformatics 27 (20), 2790-2796, 2011
3532011
Pairwise alignment of protein interaction networks
M Koyutürk, Y Kim, U Topkara, S Subramaniam, W Szpankowski, ...
Journal of Computational Biology 13 (2), 182-199, 2006
3492006
An efficient algorithm for detecting frequent subgraphs in biological networks
M Koyutürk, A Grama, W Szpankowski
Bioinformatics 20 (suppl_1), i200-i207, 2004
2722004
DADA: degree-aware algorithms for network-based disease gene prioritization
S Erten, G Bebek, RM Ewing, M Koyutürk
BioData mining 4 (1), 1-20, 2011
1942011
The KSEA App: a web-based tool for kinase activity inference from quantitative phosphoproteomics
DD Wiredja, M Koyutürk, MR Chance
Bioinformatics 33 (21), 3489-3491, 2017
1862017
An integrative-omics approach to identify functional sub-networks in human colorectal cancer
RK Nibbe, M Koyutürk, MR Chance
PLoS computational biology 6 (1), e1000639, 2010
1802010
Redundant-reader elimination in RFID systems
B Carbunar, MK Ramanathan, M Koyuturk, CM Hoffmann, AY Grama
1762005
Drug response prediction as a link prediction problem
Z Stanfield, M Coşkun, M Koyutürk
Scientific reports 7 (1), 40321, 2017
1232017
Vavien: an algorithm for prioritizing candidate disease genes based on topological similarity of proteins in interaction networks
S Erten, G Bebek, M Koyutürk
Journal of Computational Biology 18 (11), 1561-1574, 2011
1182011
Detecting conserved interaction patterns in biological networks
M Koyutürk, Y Kim, S Subramaniam, W Szpankowski, A Grama
Journal of Computational Biology 13 (7), 1299-1322, 2006
1142006
Protein–protein interaction networks and subnetworks in the biology of disease
RK Nibbe, SA Chowdhury, M Koyutürk, R Ewing, MR Chance
Wiley Interdisciplinary Reviews: Systems Biology and Medicine 3 (3), 357-367, 2011
992011
Compression, clustering, and pattern discovery in very high-dimensional discrete-attribute data sets
M Koyuturk, A Grama, N Ramakrishnan
IEEE Transactions on Knowledge and Data Engineering 17 (4), 447-461, 2005
992005
Subnetwork state functions define dysregulated subnetworks in cancer
SA Chowdhury, RK Nibbe, MR Chance, M Koyutürk
Journal of Computational Biology 18 (3), 263-281, 2011
942011
Pairwise local alignment of protein interaction networks guided by models of evolution
M Koyutürk, A Grama, W Szpankowski
Annual International Conference on Research in Computational Molecular …, 2005
892005
Assessing significance of connectivity and conservation in protein interaction networks
M Koyutürk, W Szpankowski, A Grama
Journal of Computational Biology 14 (6), 747-764, 2007
872007
Mining electronic health records data: domestic violence and adverse health effects
G Karakurt, V Patel, K Whiting, M Koyutürk
Journal of family violence 32, 79-87, 2017
812017
Network signatures of survival in glioblastoma multiforme
VN Patel, G Gokulrangan, SA Chowdhury, Y Chen, AE Sloan, M Koyutürk, ...
PLoS computational biology 9 (9), e1003237, 2013
762013
Efficient tag detection in RFID systems
B Carbunar, MK Ramanathan, M Koyutürk, S Jagannathan, A Grama
Journal of Parallel and Distributed Computing 69 (2), 180-196, 2009
702009
Network-based integration of disparate omic data to identify" silent players" in cancer
M Ruffalo, M Koyutürk, R Sharan
PLoS computational biology 11 (12), e1004595, 2015
692015
PROXIMUS: a framework for analyzing very high dimensional discrete-attributed datasets
M Koyutürk, A Grama
Proceedings of the ninth ACM SIGKDD international conference on Knowledge …, 2003
672003
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Articles 1–20