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Mario Caccamo
Mario Caccamo
NIAB
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Cited by
Cited by
Year
The zebrafish reference genome sequence and its relationship to the human genome
K Howe, MD Clark, CF Torroja, J Torrance, C Berthelot, M Muffato, ...
Nature 496 (7446), 498-503, 2013
36242013
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
RA Gibbs, L Pachter
Nature 428 (6982), 493-521, 2004
23692004
Control of Treg and TH17 cell differentiation by the aryl hydrocarbon receptor
FJ Quintana, AS Basso, AH Iglesias, T Korn, MF Farez, E Bettelli, ...
Nature 453 (7191), 65-71, 2008
17312008
Ensembl 2007
TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ...
Nucleic acids research 35 (suppl_1), D610-D617, 2007
15512007
A physical, genetic and functional sequence assembly of the barley genome.
KF Mayer, R Waugh, P Langridge, TJ Close, RP Wise, A Graner, ...
13722012
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
International Wheat Genome Sequencing Consortium (IWGSC), ...
Science 345 (6194), 1251788, 2014
13102014
Analyses of pig genomes provide insight into porcine demography and evolution
MAM Groenen, AL Archibald, H Uenishi, CK Tuggle, Y Takeuchi, ...
Nature 491 (7424), 393-398, 2012
12612012
A chromosome conformation capture ordered sequence of the barley genome
M Mascher, H Gundlach, A Himmelbach, S Beier, SO Twardziok, T Wicker, ...
Nature 544 (7651), 427-433, 2017
10162017
De novo assembly and genotyping of variants using colored de Bruijn graphs
Z Iqbal, M Caccamo, I Turner, P Flicek, G McVean
Nature genetics 44 (2), 226-232, 2012
6952012
Ensembl 2008
P Flicek, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, L Clarke, ...
Nucleic acids research 36 (suppl_1), D707-D714, 2007
6352007
Ensembl 2005
T Hubbard, D Andrews, M Cáccamo, G Cameron, Y Chen, M Clamp, ...
Nucleic acids research 33 (suppl_1), D447-D453, 2005
5812005
Ancient hybridizations among the ancestral genomes of bread wheat
T Marcussen, SR Sandve, L Heier, M Spannagl, M Pfeifer, ...
science 345 (6194), 1250092, 2014
5762014
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
5722011
An overview of Ensembl
E Birney, TD Andrews, P Bevan, M Caccamo, Y Chen, L Clarke, G Coates, ...
Genome research 14 (5), 925-928, 2004
5152004
Ensembl 2006
E Birney, D Andrews, M Cáccamo, Y Chen, L Clarke, G Coates, T Cox, ...
Nucleic acids research 34 (suppl_1), D556-D561, 2006
4732006
Conservation and divergence of gene families encoding components of innate immune response systems in zebrafish
C Stein, M Caccamo, G Laird, M Leptin
Genome biology 8 (11), 1-23, 2007
3952007
Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates
H Kikuta, M Laplante, P Navratilova, AZ Komisarczuk, PG Engström, ...
Genome research 17 (5), 545-555, 2007
3592007
The European Genome-phenome Archive of human data consented for biomedical research
I Lappalainen, J Almeida-King, V Kumanduri, A Senf, JD Spalding, ...
Nature genetics 47 (7), 692-695, 2015
2922015
Ensembl 2004
E Birney, D Andrews, P Bevan, M Caccamo, G Cameron, Y Chen, ...
Nucleic acids research 32 (suppl_1), D468-D470, 2004
2212004
NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries
RM Leggett, BJ Clavijo, L Clissold, MD Clark, M Caccamo
Bioinformatics 30 (4), 566-568, 2014
2082014
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Articles 1–20